Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC008379.1-201ENST00000463655 464 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AL132838.2-201ENST00000492041 314 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC133963.2-201ENST00000513686 578 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 RNU5A-7P-201ENST00000515979 116 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 RN7SKP141-201ENST00000516167 338 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 AP003730.1-201ENST00000524605 285 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 OR8X1P-201ENST00000534542 869 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.06□□□□□ -1.76
SIX1Q15475 DYNLL1P4-201ENST00000549314 266 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 SS18L2P2-201ENST00000583960 235 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX1Q15475 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC097504.2-201ENST00000608088 454 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AP005229.2-201ENST00000609980 697 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AC008759.3-201ENST00000613300 508 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 LINC00901.1-201ENST00000617252 152 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 ATE1-AS1-202ENST00000636460 506 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 OR5BE1P-202ENST00000641168 1176 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX1Q15475 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 AC018529.3-201ENST00000624212 2254 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SIX1Q15475 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SIX1Q15475 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SIX1Q15475 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX1Q15475 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 MAPK10-372ENST00000641954 3413 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 RN7SKP224-201ENST00000364140 325 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 RNU6-1257P-201ENST00000384625 110 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 RNU6-925P-201ENST00000384629 104 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 SNORA68.2-201ENST00000391263 128 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 HLFP1-201ENST00000402375 499 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX1Q15475 AL136131.1-201ENST00000406079 803 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC010385.1-201ENST00000412374 256 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AL024507.1-201ENST00000412741 274 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 RPS12P5-201ENST00000423449 371 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 HSFY1P1-201ENST00000423928 1178 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC115285.1-201ENST00000424879 736 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC092809.1-201ENST00000441469 474 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 RANP8-201ENST00000444720 713 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC069540.1-201ENST00000446320 988 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 PPIAP21-201ENST00000464473 501 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC021205.1-201ENST00000468797 348 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SIX1Q15475 OR5H3P-201ENST00000502817 919 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC093801.2-201ENST00000503966 1050 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC004069.2-201ENST00000505438 1114 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 SNORA31.13-201ENST00000516624 135 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 NDUFA5P2-201ENST00000519723 344 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC138701.1-201ENST00000524329 714 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 AL133457.1-201ENST00000564251 987 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC106734.1-201ENST00000568646 663 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC023575.1-201ENST00000580510 358 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC124283.4-201ENST00000581815 456 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX1Q15475 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 EIF1P6-201ENST00000600054 334 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AL391001.1-201ENST00000602747 715 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC092653.1-201ENST00000608509 531 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AC021851.1-201ENST00000608537 1082 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AF129408.1-201ENST00000608767 431 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 AL445567.2-201ENST00000618935 498 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms