Protein–RNA interactions for Protein: Q147U7

SMCO1, Single-pass membrane and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1Q147U7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SMCO1Q147U7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SMCO1Q147U7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
SMCO1Q147U7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMCO1Q147U7 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMCO1Q147U7 HSPE1P12-201ENST00000412576 301 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 OR5BE1P-201ENST00000425977 939 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 RANP8-201ENST00000444720 713 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 RPL7P59-201ENST00000447700 943 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC104308.1-201ENST00000454621 333 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 ARPC3P2-201ENST00000457786 533 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC006511.1-201ENST00000470614 315 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 CYCSP20-201ENST00000473154 315 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC012181.1-201ENST00000479895 423 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC021146.5-201ENST00000503544 545 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 RN7SKP92-201ENST00000517266 244 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 OR4A12P-201ENST00000530847 918 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 OR4H12P-201ENST00000556269 907 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC090877.1-201ENST00000561418 344 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC020915.5-201ENST00000596836 964 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AL390816.3-201ENST00000604527 1066 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AC016877.3-201ENST00000606778 504 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 OR5BE1P-202ENST00000641168 1176 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMCO1Q147U7 AL137100.1-201ENST00000556703 1620 ntBASIC3.19□□□□□ -1.9
SMCO1Q147U7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMCO1Q147U7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMCO1Q147U7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC079741.1-201ENST00000321498 212 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 RNU1-132P-201ENST00000364300 164 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 MIR153-1-201ENST00000384914 90 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL035419.1-201ENST00000397037 564 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC011933.1-201ENST00000413334 321 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 BTF3P10-201ENST00000433415 495 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 CALM1P2-201ENST00000452941 448 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC116533.1-201ENST00000459748 321 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 RPL7P5-201ENST00000471472 736 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 RN7SL860P-201ENST00000473738 223 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AK3P4-201ENST00000504283 583 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 MTND4LP22-201ENST00000508209 276 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC106806.2-201ENST00000509365 500 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 RN7SKP82-201ENST00000516786 223 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMCO1Q147U7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL451074.6-201ENST00000608512 729 ntBASIC3.18□□□□□ -1.9
SMCO1Q147U7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMCO1Q147U7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.18□□□□□ -1.9
SMCO1Q147U7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 MIR105-2-201ENST00000385083 81 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 RPS16P5-201ENST00000406501 404 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 RPL23AP47-201ENST00000408017 460 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AL590139.1-201ENST00000416267 400 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC069213.2-201ENST00000420238 366 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 RPL7P46-201ENST00000425129 740 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 HIGD1AP12-201ENST00000427832 281 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 DPPA2P1-201ENST00000428060 556 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AL590103.1-201ENST00000434488 307 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AL138878.2-201ENST00000440581 1241 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms