Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 AL049839.1-201ENST00000556151 657 ntBASIC4.39□□□□□ -1.71
LTBQ06643 DUXAP1-201ENST00000556632 463 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC087477.6-201ENST00000559595 843 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.39□□□□□ -1.71
LTBQ06643 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBQ06643 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 AP000811.1-201ENST00000603803 651 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AL031281.1-201ENST00000604049 488 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AL139418.1-201ENST00000613613 177 ntBASIC4.39□□□□□ -1.71
LTBQ06643 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AL161637.1-201ENST00000622380 412 ntBASIC4.39□□□□□ -1.71
LTBQ06643 AC006840.1-201ENST00000623069 542 ntBASIC4.39□□□□□ -1.71
LTBQ06643 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.39□□□□□ -1.71
LTBQ06643 MAPK10-320ENST00000641462 6696 ntBASIC4.39□□□□□ -1.71
LTBQ06643 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
LTBQ06643 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBQ06643 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LTBQ06643 AL390237.1-201ENST00000404226 1415 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC093536.2-201ENST00000565257 1406 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 AC000367.1-201ENST00000452711 1766 ntBASIC4.38□□□□□ -1.71
LTBQ06643 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 SCN1A-220ENST00000641603 12506 ntBASIC4.38□□□□□ -1.71
LTBQ06643 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LTBQ06643 Y_RNA.192-201ENST00000363977 102 ntBASIC4.38□□□□□ -1.71
LTBQ06643 RNU6-304P-201ENST00000364855 107 ntBASIC4.38□□□□□ -1.71
LTBQ06643 Y_RNA.465-201ENST00000384293 102 ntBASIC4.38□□□□□ -1.71
LTBQ06643 RNA5SP332-201ENST00000391063 115 ntBASIC4.38□□□□□ -1.71
LTBQ06643 Z97832.1-201ENST00000402490 328 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AL355379.1-201ENST00000405542 640 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 AL645608.4-201ENST00000423619 154 ntBASIC4.38□□□□□ -1.71
LTBQ06643 RPL21P43-201ENST00000425440 472 ntBASIC4.38□□□□□ -1.71
LTBQ06643 YWHAEP5-201ENST00000431545 765 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 AC122718.1-201ENST00000439448 744 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC092170.1-201ENST00000440211 356 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 CALM1P2-201ENST00000452941 448 ntBASIC4.38□□□□□ -1.71
LTBQ06643 USP9YP10-201ENST00000454868 628 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.38□□□□□ -1.71
LTBQ06643 FAM133DP-201ENST00000464802 691 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC063943.1-201ENST00000465434 453 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC006967.1-201ENST00000467608 589 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LINC00888-204ENST00000487386 421 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 AC140172.1-201ENST00000502928 141 ntBASIC4.38□□□□□ -1.71
LTBQ06643 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.38□□□□□ -1.71
LTBQ06643 USP9YP5-201ENST00000511770 630 ntBASIC4.38□□□□□ -1.71
LTBQ06643 MTND3P5-201ENST00000512798 333 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 RNU6-709P-201ENST00000517257 104 ntBASIC4.38□□□□□ -1.71
LTBQ06643 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.38□□□□□ -1.71
LTBQ06643 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.38□□□□□ -1.71
LTBQ06643 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.38□□□□□ -1.71
LTBQ06643 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.38□□□□□ -1.71
LTBQ06643 MIR3915-201ENST00000578518 97 ntBASIC4.38□□□□□ -1.71
LTBQ06643 MIR5708-201ENST00000579723 85 ntBASIC4.38□□□□□ -1.71
LTBQ06643 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 VN1R90P-201ENST00000595717 726 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC245297.2-201ENST00000610119 565 ntBASIC4.38□□□□□ -1.71
LTBQ06643 VN1R74P-201ENST00000613259 503 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AL133243.1-201ENST00000614487 366 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.38□□□□□ -1.71
LTBQ06643 MIR6830-201ENST00000636015 70 ntBASIC4.38□□□□□ -1.71
LTBQ06643 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.38□□□□□ -1.71
LTBQ06643 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.38□□□□□ -1.71
LTBQ06643 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms