Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6-1226P-201ENST00000384317 107 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC025750.1-201ENST00000399891 379 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 MIR320C1-201ENST00000408566 88 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC073136.2-201ENST00000417282 849 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AL358176.3-201ENST00000420757 454 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC006335.2-201ENST00000437993 330 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 MED28P3-201ENST00000444288 531 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 PAXBP1P1-201ENST00000449315 447 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AL450023.1-201ENST00000450868 751 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 RPL12P39-201ENST00000455456 496 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 CFTRP1-201ENST00000456646 183 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC023424.1-201ENST00000496058 459 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 OR4A45P-201ENST00000529954 901 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL133457.1-201ENST00000564251 987 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC012414.6-201ENST00000568241 401 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 MIR4311-201ENST00000580794 100 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 MIR4660-201ENST00000583549 74 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 MAGOH2P-202ENST00000584384 429 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC080013.4-201ENST00000607624 649 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 AL590240.3-201ENST00000621416 943 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC093849.1-201ENST00000563631 2209 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 AP002907.1-201ENST00000606361 1430 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX6-1P78426 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX6-1P78426 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX6-1P78426 AC112198.2-201ENST00000426589 6996 ntBASIC4.86□□□□□ -1.63
NKX6-1P78426 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC018809.2-201ENST00000602436 3823 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX6-1P78426 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
NKX6-1P78426 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX6-1P78426 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX6-1P78426 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NKX6-1P78426 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 RN7SKP103-201ENST00000363848 320 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AL024474.1-201ENST00000404655 591 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AL663109.1-201ENST00000411498 844 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AL590762.4-201ENST00000425885 253 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 CYCSP6-201ENST00000434498 302 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 UBE2V1P3-201ENST00000439651 417 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 CDC27P1-201ENST00000445384 715 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 ST13P20-201ENST00000447996 1065 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 DNAJC19P1-201ENST00000455312 319 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AC017015.1-201ENST00000477387 286 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 RN7SL97P-201ENST00000486780 299 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 RNF138P1-201ENST00000502765 546 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AC021678.1-201ENST00000505195 936 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 CBX3P3-201ENST00000508108 532 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 RN7SKP82-201ENST00000516786 223 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 IGLV3-24-201ENST00000517477 197 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 HSPA8P13-201ENST00000523715 472 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX6-1P78426 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC127381.1-201ENST00000555979 939 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX6-1P78426 MRPS21P7-201ENST00000566937 238 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC141257.3-201ENST00000572906 215 ntBASIC4.85□□□□□ -1.63
NKX6-1P78426 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.85□□□□□ -1.63
NKX6-1P78426 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms