Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC073476.4-201ENST00000628409 72 ntBASIC2.37□□□□□ -2.03
RPL39P62891 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
RPL39P62891 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RPL39P62891 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RPL39P62891 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
RPL39P62891 AC107081.3-201ENST00000612715 2034 ntBASIC2.37□□□□□ -2.03
RPL39P62891 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RPL39P62891 MTND5P27-201ENST00000428871 1720 ntBASIC2.37□□□□□ -2.03
RPL39P62891 MFSD8-233ENST00000641482 4860 ntBASIC2.36□□□□□ -2.03
RPL39P62891 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 RNU1-32P-201ENST00000363937 159 ntBASIC2.36□□□□□ -2.03
RPL39P62891 RNA5SP283-201ENST00000365604 119 ntBASIC2.36□□□□□ -2.03
RPL39P62891 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 RNU1-13P-201ENST00000384499 162 ntBASIC2.36□□□□□ -2.03
RPL39P62891 EI24P2-201ENST00000397776 1076 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 AL583834.1-201ENST00000406943 343 ntBASIC2.36□□□□□ -2.03
RPL39P62891 RN7SKP156-201ENST00000410308 342 ntBASIC2.36□□□□□ -2.03
RPL39P62891 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 AC114755.5-201ENST00000447760 831 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 AC115115.1-201ENST00000449927 248 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 PPIAP3-201ENST00000450588 505 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 AC026402.1-201ENST00000513642 170 ntBASIC2.36□□□□□ -2.03
RPL39P62891 RNA5SP217-201ENST00000515959 91 ntBASIC2.36□□□□□ -2.03
RPL39P62891 SNORA70.14-201ENST00000516205 110 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 AGGF1P6-201ENST00000569213 976 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.36□□□□□ -2.03
RPL39P62891 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 MIR6875-201ENST00000617506 72 ntBASIC2.36□□□□□ -2.03
RPL39P62891 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.36□□□□□ -2.03
RPL39P62891 AC067852.7-201ENST00000623270 535 ntBASIC2.36□□□□□ -2.03
RPL39P62891 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
RPL39P62891 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RPL39P62891 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.36□□□□□ -2.03
RPL39P62891 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 AC093908.1-201ENST00000623125 8092 ntBASIC2.35□□□□□ -2.03
RPL39P62891 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
RPL39P62891 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPL39P62891 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 CDC27P2-201ENST00000425026 1922 ntBASIC2.35□□□□□ -2.03
RPL39P62891 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPL39P62891 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 RPL32P35-201ENST00000415214 394 ntBASIC2.35□□□□□ -2.03
RPL39P62891 AL049610.1-201ENST00000423374 372 ntBASIC2.35□□□□□ -2.03
RPL39P62891 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.35□□□□□ -2.03
RPL39P62891 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.35□□□□□ -2.03
RPL39P62891 CST9LP2-201ENST00000437612 320 ntBASIC2.35□□□□□ -2.03
RPL39P62891 NDUFS5P3-201ENST00000450668 321 ntBASIC2.35□□□□□ -2.03
RPL39P62891 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.35□□□□□ -2.03
RPL39P62891 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC2.35□□□□□ -2.03
RPL39P62891 AC091564.1-201ENST00000464563 479 ntBASIC2.35□□□□□ -2.03
RPL39P62891 RPS20P21-201ENST00000466859 343 ntBASIC2.35□□□□□ -2.03
RPL39P62891 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.35□□□□□ -2.03
RPL39P62891 GAPDHP36-201ENST00000480688 918 ntBASIC2.35□□□□□ -2.03
RPL39P62891 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
RPL39P62891 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.35□□□□□ -2.03
RPL39P62891 RN7SKP141-201ENST00000516167 338 ntBASIC2.35□□□□□ -2.03
RPL39P62891 RN7SKP116-201ENST00000516902 319 ntBASIC2.35□□□□□ -2.03
RPL39P62891 AP001207.2-201ENST00000519490 539 ntBASIC2.35□□□□□ -2.03
RPL39P62891 IGKV2D-19-201ENST00000523346 262 ntBASIC2.35□□□□□ -2.03
RPL39P62891 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.35□□□□□ -2.03
RPL39P62891 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 AL365400.2-201ENST00000605604 902 ntBASIC2.35□□□□□ -2.03
RPL39P62891 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.35□□□□□ -2.03
RPL39P62891 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.35□□□□□ -2.03
RPL39P62891 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.35□□□□□ -2.03
RPL39P62891 AC074140.1-201ENST00000621617 208 ntBASIC2.35□□□□□ -2.03
RPL39P62891 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPL39P62891 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RPL39P62891 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.35□□□□□ -2.03
RPL39P62891 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RPL39P62891 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 OR10AB1P-202ENST00000641219 1686 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AL645937.1-201ENST00000641739 1652 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.34□□□□□ -2.03
RPL39P62891 AL356274.2-201ENST00000624379 3752 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms