Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RPL23AP15-201ENST00000450202 459 ntBASIC4.3□□□□□ -1.72
CDH13P55290 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH13P55290 AC092324.1-201ENST00000468671 324 ntBASIC4.3□□□□□ -1.72
CDH13P55290 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH13P55290 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH13P55290 AC093270.2-201ENST00000486157 792 ntBASIC4.3□□□□□ -1.72
CDH13P55290 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 SOD1P3-201ENST00000518682 454 ntBASIC4.3□□□□□ -1.72
CDH13P55290 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH13P55290 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 AP000238.1-201ENST00000608759 426 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AC099676.1-201ENST00000608886 657 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AL359535.1-201ENST00000612100 1087 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AC123767.1-202ENST00000620407 817 ntBASIC4.3□□□□□ -1.72
CDH13P55290 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 CASC19-222ENST00000641321 1173 ntBASIC4.3□□□□□ -1.72
CDH13P55290 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH13P55290 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 AL139811.1-201ENST00000424779 2299 ntBASIC4.3□□□□□ -1.72
CDH13P55290 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
CDH13P55290 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH13P55290 Y_RNA.578-201ENST00000390903 88 ntBASIC4.29□□□□□ -1.72
CDH13P55290 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH13P55290 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.29□□□□□ -1.72
CDH13P55290 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.29□□□□□ -1.72
CDH13P55290 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH13P55290 HSFY1P1-201ENST00000423928 1178 ntBASIC4.29□□□□□ -1.72
CDH13P55290 BRWD1P3-201ENST00000428816 390 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH13P55290 RPL12P3-201ENST00000440080 396 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC069285.2-201ENST00000440210 275 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC073648.4-201ENST00000442655 781 ntBASIC4.29□□□□□ -1.72
CDH13P55290 RPL7P31-201ENST00000450192 724 ntBASIC4.29□□□□□ -1.72
CDH13P55290 NPM1P13-201ENST00000452663 865 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
CDH13P55290 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 RPL21P131-201ENST00000497298 483 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC105233.1-201ENST00000498840 781 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH13P55290 MTATP6P22-201ENST00000507369 598 ntBASIC4.29□□□□□ -1.72
CDH13P55290 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH13P55290 KRT19P6-201ENST00000510983 209 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC005351.1-201ENST00000511152 786 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC015795.1-201ENST00000513669 327 ntBASIC4.29□□□□□ -1.72
CDH13P55290 RNA5SP154-201ENST00000516193 111 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC023632.1-201ENST00000518463 375 ntBASIC4.29□□□□□ -1.72
CDH13P55290 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH13P55290 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH13P55290 AC008687.2-201ENST00000597865 520 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AL020997.3-201ENST00000602843 359 ntBASIC4.29□□□□□ -1.72
CDH13P55290 RPP40P2-201ENST00000603596 712 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AL583856.2-201ENST00000606298 543 ntBASIC4.29□□□□□ -1.72
CDH13P55290 FAM25E-202ENST00000608562 189 ntBASIC4.29□□□□□ -1.72
CDH13P55290 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 AL133243.1-201ENST00000614487 366 ntBASIC4.29□□□□□ -1.72
CDH13P55290 AC067931.1-201ENST00000624190 671 ntBASIC4.29□□□□□ -1.72
CDH13P55290 OR1S1-201ENST00000624470 978 ntBASIC4.29□□□□□ -1.72
CDH13P55290 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CDH13P55290 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH13P55290 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CDH13P55290 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH13P55290 AC106754.1-201ENST00000562632 1513 ntBASIC4.29□□□□□ -1.72
CDH13P55290 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CDH13P55290 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH13P55290 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CDH13P55290 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 MTND4P8-201ENST00000514997 1362 ntBASIC4.28□□□□□ -1.72
CDH13P55290 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH13P55290 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
CDH13P55290 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CDH13P55290 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
CDH13P55290 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 RNU6-224P-201ENST00000384055 107 ntBASIC4.28□□□□□ -1.72
CDH13P55290 MIR93-201ENST00000385024 80 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL079342.2-201ENST00000403367 482 ntBASIC4.28□□□□□ -1.72
CDH13P55290 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH13P55290 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms