Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KPNA2P2-201ENST00000419546 1489 ntBASIC4.13□□□□□ -1.75
CDH11P55287 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 RNA5SP151-201ENST00000365632 117 ntBASIC4.13□□□□□ -1.75
CDH11P55287 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 RNA5SP332-201ENST00000391063 115 ntBASIC4.13□□□□□ -1.75
CDH11P55287 RPS3AP23-201ENST00000401762 784 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL079342.2-201ENST00000403367 482 ntBASIC4.13□□□□□ -1.75
CDH11P55287 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
CDH11P55287 VPS26BP1-201ENST00000417155 755 ntBASIC4.13□□□□□ -1.75
CDH11P55287 RPL22P18-201ENST00000417197 377 ntBASIC4.13□□□□□ -1.75
CDH11P55287 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AC009480.2-201ENST00000422916 432 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 RAC1P8-201ENST00000427086 527 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 AC234064.1-201ENST00000436312 247 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL031663.1-201ENST00000437445 219 ntBASIC4.13□□□□□ -1.75
CDH11P55287 TPTE2P6-202ENST00000445572 1007 ntBASIC4.13□□□□□ -1.75
CDH11P55287 H2AFZP5-201ENST00000446960 382 ntBASIC4.13□□□□□ -1.75
CDH11P55287 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH11P55287 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 MRPL35P4-201ENST00000453682 566 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL121877.1-201ENST00000453704 622 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 BX248409.1-201ENST00000455497 255 ntBASIC4.13□□□□□ -1.75
CDH11P55287 NAP1L1P3-201ENST00000462291 880 ntBASIC4.13□□□□□ -1.75
CDH11P55287 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 NDUFA5P9-201ENST00000472609 340 ntBASIC4.13□□□□□ -1.75
CDH11P55287 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH11P55287 MTCYBP35-201ENST00000503630 1137 ntBASIC4.13□□□□□ -1.75
CDH11P55287 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 NDUFB4P12-201ENST00000513465 390 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AC008494.2-201ENST00000514544 370 ntBASIC4.13□□□□□ -1.75
CDH11P55287 MRPS36P3-201ENST00000519284 130 ntBASIC4.13□□□□□ -1.75
CDH11P55287 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 IGLV3-26-201ENST00000520756 302 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH11P55287 PDCD5P1-201ENST00000543528 309 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH11P55287 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 AC015688.2-201ENST00000584523 262 ntBASIC4.13□□□□□ -1.75
CDH11P55287 NTAN1P1-201ENST00000603150 646 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AC008745.1-201ENST00000604064 271 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL392112.1-201ENST00000605115 829 ntBASIC4.13□□□□□ -1.75
CDH11P55287 Z99289.3-201ENST00000605586 594 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL583856.2-201ENST00000606298 543 ntBASIC4.13□□□□□ -1.75
CDH11P55287 MIR378J-201ENST00000611988 109 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL138721.1-201ENST00000616756 179 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL158163.2-201ENST00000619110 700 ntBASIC4.13□□□□□ -1.75
CDH11P55287 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 AP002967.1-201ENST00000624203 539 ntBASIC4.13□□□□□ -1.75
CDH11P55287 OR1S1-201ENST00000624470 978 ntBASIC4.13□□□□□ -1.75
CDH11P55287 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH11P55287 LINC02211-204ENST00000642024 1070 ntBASIC4.13□□□□□ -1.75
CDH11P55287 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 MTND4P8-201ENST00000514997 1362 ntBASIC4.13□□□□□ -1.75
CDH11P55287 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH11P55287 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 ASNSP1-204ENST00000641977 1664 ntBASIC4.13□□□□□ -1.75
CDH11P55287 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH11P55287 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH11P55287 AC135352.1-201ENST00000506173 1418 ntBASIC4.12□□□□□ -1.75
CDH11P55287 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH11P55287 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH11P55287 MIR525-201ENST00000384978 85 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 AC099336.2-201ENST00000422457 254 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 AC084290.1-201ENST00000434995 374 ntBASIC4.12□□□□□ -1.75
CDH11P55287 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH11P55287 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 AC133473.1-201ENST00000455173 299 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC099560.2-201ENST00000457554 255 ntBASIC4.12□□□□□ -1.75
CDH11P55287 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH11P55287 AC068587.2-201ENST00000478386 781 ntBASIC4.12□□□□□ -1.75
CDH11P55287 RPL23AP44-201ENST00000482216 473 ntBASIC4.12□□□□□ -1.75
CDH11P55287 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH11P55287 MTND4LP2-201ENST00000502312 285 ntBASIC4.12□□□□□ -1.75
CDH11P55287 PPBPP1-201ENST00000510807 373 ntBASIC4.12□□□□□ -1.75
CDH11P55287 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms