Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ARAFP2-201ENST00000440565 559 ntBASIC5□□□□□ -1.61
COPB1P53618 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 SCARNA10-201ENST00000459255 330 ntBASIC5□□□□□ -1.61
COPB1P53618 AC021205.1-201ENST00000468797 348 ntBASIC5□□□□□ -1.61
COPB1P53618 AC006463.2-201ENST00000473326 348 ntBASIC5□□□□□ -1.61
COPB1P53618 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5□□□□□ -1.61
COPB1P53618 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 IGLV3-26-201ENST00000520756 302 ntBASIC5□□□□□ -1.61
COPB1P53618 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5□□□□□ -1.61
COPB1P53618 AC010198.2-201ENST00000550612 259 ntBASIC5□□□□□ -1.61
COPB1P53618 AL110118.1-201ENST00000553543 400 ntBASIC5□□□□□ -1.61
COPB1P53618 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 MIR4666A-201ENST00000580160 79 ntBASIC5□□□□□ -1.61
COPB1P53618 RN7SL176P-201ENST00000580352 264 ntBASIC5□□□□□ -1.61
COPB1P53618 MIR548Y-201ENST00000582739 110 ntBASIC5□□□□□ -1.61
COPB1P53618 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5□□□□□ -1.61
COPB1P53618 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 NBR2-204ENST00000587322 63 ntBASIC5□□□□□ -1.61
COPB1P53618 AP001542.2-201ENST00000593141 364 ntBASIC5□□□□□ -1.61
COPB1P53618 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5□□□□□ -1.61
COPB1P53618 AC010201.1-201ENST00000605051 540 ntBASIC5□□□□□ -1.61
COPB1P53618 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5□□□□□ -1.61
COPB1P53618 AP001005.3-201ENST00000622049 129 ntBASIC5□□□□□ -1.61
COPB1P53618 AC021106.3-201ENST00000623925 531 ntBASIC5□□□□□ -1.61
COPB1P53618 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COPB1P53618 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
COPB1P53618 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5□□□□□ -1.61
COPB1P53618 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
COPB1P53618 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.99□□□□□ -1.61
COPB1P53618 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.99□□□□□ -1.61
COPB1P53618 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COPB1P53618 MIR320B1-201ENST00000390209 79 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC093719.1-202ENST00000392735 373 ntBASIC4.99□□□□□ -1.61
COPB1P53618 RNA5SP113-201ENST00000410486 84 ntBASIC4.99□□□□□ -1.61
COPB1P53618 RNU6-575P-201ENST00000411326 105 ntBASIC4.99□□□□□ -1.61
COPB1P53618 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 MTND4P20-201ENST00000424125 869 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.99□□□□□ -1.61
COPB1P53618 CDY14P-201ENST00000431260 1014 ntBASIC4.99□□□□□ -1.61
COPB1P53618 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 MTCO3P5-201ENST00000433620 714 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 AC234064.1-201ENST00000436312 247 ntBASIC4.99□□□□□ -1.61
COPB1P53618 TMX2P1-201ENST00000436507 708 ntBASIC4.99□□□□□ -1.61
COPB1P53618 GTF2IP7-202ENST00000436677 309 ntBASIC4.99□□□□□ -1.61
COPB1P53618 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 CACYBPP1-201ENST00000438592 684 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC009263.1-201ENST00000441193 1239 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC118469.1-201ENST00000442943 488 ntBASIC4.99□□□□□ -1.61
COPB1P53618 MTND2P4-201ENST00000445034 1004 ntBASIC4.99□□□□□ -1.61
COPB1P53618 CDY23P-201ENST00000451661 1014 ntBASIC4.99□□□□□ -1.61
COPB1P53618 RPL7P48-201ENST00000461513 746 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC022795.1-201ENST00000473808 480 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC104763.1-201ENST00000475274 360 ntBASIC4.99□□□□□ -1.61
COPB1P53618 RPL7AP10-201ENST00000481016 791 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC008897.1-201ENST00000494006 347 ntBASIC4.99□□□□□ -1.61
COPB1P53618 OR2A20P-203ENST00000498397 1268 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 RPF2P2-201ENST00000504693 896 ntBASIC4.99□□□□□ -1.61
COPB1P53618 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.99□□□□□ -1.61
COPB1P53618 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 AC104108.1-201ENST00000509930 412 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 Y_RNA.655-201ENST00000515919 96 ntBASIC4.99□□□□□ -1.61
COPB1P53618 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.99□□□□□ -1.61
COPB1P53618 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.99□□□□□ -1.61
COPB1P53618 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 AP002812.4-201ENST00000532139 286 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.99□□□□□ -1.61
COPB1P53618 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.99□□□□□ -1.61
COPB1P53618 DUXAP1-201ENST00000556632 463 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC044913.1-201ENST00000557200 430 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC009117.1-201ENST00000563948 554 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC008759.1-201ENST00000589783 983 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC068790.7-201ENST00000602347 528 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AL135786.2-201ENST00000608422 615 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AP000238.1-201ENST00000608759 426 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC105227.2-201ENST00000615075 605 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AC087385.3-201ENST00000620477 187 ntBASIC4.99□□□□□ -1.61
COPB1P53618 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COPB1P53618 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.99□□□□□ -1.61
COPB1P53618 AC055839.1-201ENST00000634467 498 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AL596275.2-204ENST00000641628 552 ntBASIC4.99□□□□□ -1.61
COPB1P53618 AL596275.2-206ENST00000641957 626 ntBASIC4.99□□□□□ -1.61
COPB1P53618 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 MTCO1P6-201ENST00000481192 1384 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms