Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL139286.1-201ENST00000604465 483 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC010857.1-201ENST00000606398 594 ntBASIC3.76□□□□□ -1.81
RPA3P35244 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.76□□□□□ -1.81
RPA3P35244 AC000123.2-201ENST00000623124 461 ntBASIC3.76□□□□□ -1.81
RPA3P35244 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.76□□□□□ -1.81
RPA3P35244 AF001550.2-201ENST00000636643 217 ntBASIC3.76□□□□□ -1.81
RPA3P35244 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 FAM91A3P-201ENST00000456826 2544 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.76□□□□□ -1.81
RPA3P35244 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
RPA3P35244 RNU6-1251P-201ENST00000364502 107 ntBASIC3.75□□□□□ -1.81
RPA3P35244 MIR184-201ENST00000384962 84 ntBASIC3.75□□□□□ -1.81
RPA3P35244 ZNF602P-201ENST00000405929 924 ntBASIC3.75□□□□□ -1.81
RPA3P35244 MIR1193-201ENST00000408109 78 ntBASIC3.75□□□□□ -1.81
RPA3P35244 AL138785.1-201ENST00000425821 331 ntBASIC3.75□□□□□ -1.81
RPA3P35244 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.75□□□□□ -1.81
RPA3P35244 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RPA3P35244 ELOCP3-201ENST00000439303 348 ntBASIC3.75□□□□□ -1.81
RPA3P35244 MORF4L1P4-201ENST00000450245 976 ntBASIC3.75□□□□□ -1.81
RPA3P35244 NPM1P17-201ENST00000479221 602 ntBASIC3.75□□□□□ -1.81
RPA3P35244 AL161747.1-201ENST00000480068 358 ntBASIC3.75□□□□□ -1.81
RPA3P35244 AC005912.1-201ENST00000495392 255 ntBASIC3.75□□□□□ -1.81
RPA3P35244 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.75□□□□□ -1.81
RPA3P35244 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RPA3P35244 PCBP2P3-201ENST00000509726 843 ntBASIC3.75□□□□□ -1.81
RPA3P35244 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.75□□□□□ -1.81
RPA3P35244 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.75□□□□□ -1.81
RPA3P35244 DEFB109D-201ENST00000529497 240 ntBASIC3.75□□□□□ -1.81
RPA3P35244 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.75□□□□□ -1.81
RPA3P35244 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.75□□□□□ -1.81
RPA3P35244 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.75□□□□□ -1.81
RPA3P35244 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
RPA3P35244 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RPA3P35244 AL445437.1-201ENST00000623157 3087 ntBASIC3.75□□□□□ -1.81
RPA3P35244 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RPA3P35244 AL356489.2-201ENST00000566968 3528 ntBASIC3.74□□□□□ -1.81
RPA3P35244 RNA5SP479-201ENST00000364858 117 ntBASIC3.74□□□□□ -1.81
RPA3P35244 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RPA3P35244 RNU6-1279P-201ENST00000383917 103 ntBASIC3.74□□□□□ -1.81
RPA3P35244 RNU6-213P-201ENST00000384051 104 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPA3P35244 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 NDUFS5P3-201ENST00000450668 321 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AL162388.1-201ENST00000450912 352 ntBASIC3.74□□□□□ -1.81
RPA3P35244 MRPS31P2-201ENST00000451581 518 ntBASIC3.74□□□□□ -1.81
RPA3P35244 CYCSP53-201ENST00000455540 265 ntBASIC3.74□□□□□ -1.81
RPA3P35244 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AL139099.1-201ENST00000497398 403 ntBASIC3.74□□□□□ -1.81
RPA3P35244 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.74□□□□□ -1.81
RPA3P35244 SMARCE1P4-201ENST00000523647 241 ntBASIC3.74□□□□□ -1.81
RPA3P35244 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC084757.1-201ENST00000559987 490 ntBASIC3.74□□□□□ -1.81
RPA3P35244 HNRNPCP4-201ENST00000571636 900 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 AC022916.3-201ENST00000592961 742 ntBASIC3.74□□□□□ -1.81
RPA3P35244 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC090912.3-201ENST00000609775 533 ntBASIC3.74□□□□□ -1.81
RPA3P35244 RMST_8.1-201ENST00000610287 165 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC024941.1-201ENST00000612250 334 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AL592295.2-201ENST00000612578 206 ntBASIC3.74□□□□□ -1.81
RPA3P35244 MIR6798-201ENST00000612887 67 ntBASIC3.74□□□□□ -1.81
RPA3P35244 NF1P10-201ENST00000613227 742 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.74□□□□□ -1.81
RPA3P35244 AC016957.2-201ENST00000616998 848 ntBASIC3.74□□□□□ -1.81
RPA3P35244 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RPA3P35244 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPA3P35244 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RPA3P35244 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPA3P35244 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPA3P35244 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.74□□□□□ -1.81
RPA3P35244 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
RPA3P35244 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.73□□□□□ -1.81
RPA3P35244 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RPA3P35244 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RPA3P35244 RNA5SP515-201ENST00000364570 118 ntBASIC3.73□□□□□ -1.81
RPA3P35244 SNORA57.1-201ENST00000391227 145 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AL450992.3-201ENST00000413192 568 ntBASIC3.73□□□□□ -1.81
RPA3P35244 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.73□□□□□ -1.81
RPA3P35244 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.73□□□□□ -1.81
RPA3P35244 AL691447.1-201ENST00000419456 387 ntBASIC3.73□□□□□ -1.81
RPA3P35244 DPY19L1P2-201ENST00000426647 915 ntBASIC3.73□□□□□ -1.81
RPA3P35244 RPS29P7-201ENST00000439662 171 ntBASIC3.73□□□□□ -1.81
RPA3P35244 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.73□□□□□ -1.81
RPA3P35244 AL157884.3-201ENST00000448273 1184 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.73□□□□□ -1.81
RPA3P35244 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.73□□□□□ -1.81
RPA3P35244 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.73□□□□□ -1.81
RPA3P35244 AC026784.1-201ENST00000507986 352 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.73□□□□□ -1.81
RPA3P35244 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.73□□□□□ -1.81
RPA3P35244 CYCSP30-201ENST00000546447 172 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AC084824.1-201ENST00000550917 1005 ntBASIC3.73□□□□□ -1.81
RPA3P35244 AC006960.3-201ENST00000561845 705 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms