Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNA5SP27-201ENST00000363839 119 ntBASIC4.98□□□□□ -1.61
CIITAP33076 RNU4-51P-201ENST00000364206 140 ntBASIC4.98□□□□□ -1.61
CIITAP33076 SNORD116-12-201ENST00000384468 92 ntBASIC4.98□□□□□ -1.61
CIITAP33076 MTCO1P56-201ENST00000401674 224 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AL049545.1-201ENST00000401856 572 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AL136310.1-201ENST00000404926 654 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AL590290.1-201ENST00000405336 380 ntBASIC4.98□□□□□ -1.61
CIITAP33076 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 RN7SKP167-201ENST00000411047 285 ntBASIC4.98□□□□□ -1.61
CIITAP33076 GAPDHP49-201ENST00000421421 961 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 CHIAP3-201ENST00000423668 1133 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC009965.2-201ENST00000425328 970 ntBASIC4.98□□□□□ -1.61
CIITAP33076 C1DP1-201ENST00000426049 402 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AL158073.1-201ENST00000426848 1104 ntBASIC4.98□□□□□ -1.61
CIITAP33076 MTND5P25-201ENST00000430499 799 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.98□□□□□ -1.61
CIITAP33076 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.98□□□□□ -1.61
CIITAP33076 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.98□□□□□ -1.61
CIITAP33076 AL031663.1-201ENST00000437445 219 ntBASIC4.98□□□□□ -1.61
CIITAP33076 PHBP16-201ENST00000446318 950 ntBASIC4.98□□□□□ -1.61
CIITAP33076 RPS6P2-201ENST00000454208 705 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC090013.1-201ENST00000485147 480 ntBASIC4.98□□□□□ -1.61
CIITAP33076 RN7SL812P-201ENST00000493791 279 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.98□□□□□ -1.61
CIITAP33076 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 LRRC6P1-201ENST00000532188 885 ntBASIC4.98□□□□□ -1.61
CIITAP33076 TRAV8-5-201ENST00000537369 341 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.98□□□□□ -1.61
CIITAP33076 ATP5J2P6-201ENST00000565203 266 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.98□□□□□ -1.61
CIITAP33076 AC010200.2-201ENST00000605098 235 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC096586.1-201ENST00000610267 561 ntBASIC4.98□□□□□ -1.61
CIITAP33076 MIR378J-201ENST00000611988 109 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.98□□□□□ -1.61
CIITAP33076 AL353726.1-201ENST00000614041 1000 ntBASIC4.98□□□□□ -1.61
CIITAP33076 AC007546.2-201ENST00000623996 360 ntBASIC4.98□□□□□ -1.61
CIITAP33076 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.98□□□□□ -1.61
CIITAP33076 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CIITAP33076 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CIITAP33076 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
CIITAP33076 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 AC105074.1-201ENST00000623380 3095 ntBASIC4.97□□□□□ -1.61
CIITAP33076 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.97□□□□□ -1.61
CIITAP33076 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CIITAP33076 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.97□□□□□ -1.61
CIITAP33076 AL078604.1-201ENST00000404609 466 ntBASIC4.97□□□□□ -1.61
CIITAP33076 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC004690.1-201ENST00000418216 328 ntBASIC4.97□□□□□ -1.61
CIITAP33076 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 RPS6P15-201ENST00000431996 751 ntBASIC4.97□□□□□ -1.61
CIITAP33076 RPEP2-201ENST00000432149 701 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AC011998.1-201ENST00000433403 117 ntBASIC4.97□□□□□ -1.61
CIITAP33076 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 MTND6P18-201ENST00000439477 513 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AL353093.1-201ENST00000441292 436 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.97□□□□□ -1.61
CIITAP33076 PTMAP3-201ENST00000447474 330 ntBASIC4.97□□□□□ -1.61
CIITAP33076 TPMTP4-201ENST00000450749 678 ntBASIC4.97□□□□□ -1.61
CIITAP33076 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC011037.1-201ENST00000483964 558 ntBASIC4.97□□□□□ -1.61
CIITAP33076 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 ATP1B1P1-201ENST00000509767 915 ntBASIC4.97□□□□□ -1.61
CIITAP33076 SMARCE1P4-201ENST00000523647 241 ntBASIC4.97□□□□□ -1.61
CIITAP33076 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
CIITAP33076 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC009094.1-201ENST00000564443 426 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.97□□□□□ -1.61
CIITAP33076 AC040904.1-201ENST00000590850 223 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.97□□□□□ -1.61
CIITAP33076 AC013470.4-201ENST00000619978 986 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AC026422.1-201ENST00000623961 452 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AC017037.3-201ENST00000625016 472 ntBASIC4.97□□□□□ -1.61
CIITAP33076 AC090897.3-201ENST00000636973 1157 ntBASIC4.97□□□□□ -1.61
CIITAP33076 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CIITAP33076 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CIITAP33076 MTND4P31-201ENST00000425607 1343 ntBASIC4.97□□□□□ -1.61
CIITAP33076 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CIITAP33076 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms