Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 OR10D4P-201ENST00000525892 951 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.53□□□□□ -1.84
COL5A1P20908 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.53□□□□□ -1.84
COL5A1P20908 MIR4325-201ENST00000583049 90 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.53□□□□□ -1.84
COL5A1P20908 MTCO3P22-201ENST00000603219 784 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 AL450472.3-201ENST00000615578 367 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 MIR6715A-201ENST00000615929 79 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL5A1P20908 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.84
COL5A1P20908 KPNA2P2-201ENST00000419546 1489 ntBASIC3.53□□□□□ -1.84
COL5A1P20908 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
COL5A1P20908 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL5A1P20908 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
COL5A1P20908 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL5A1P20908 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 AL121834.1-202ENST00000404494 277 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 Z75741.1-201ENST00000446793 314 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.52□□□□□ -1.85
COL5A1P20908 RPS3AP14-201ENST00000483907 780 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 AC093663.1-201ENST00000497190 394 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 AC097462.2-201ENST00000504623 481 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.52□□□□□ -1.85
COL5A1P20908 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.52□□□□□ -1.85
COL5A1P20908 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.52□□□□□ -1.85
COL5A1P20908 MIR4727-201ENST00000622232 55 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 AL022322.2-201ENST00000624072 20397 ntBASIC3.52□□□□□ -1.85
COL5A1P20908 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.52□□□□□ -1.85
COL5A1P20908 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL5A1P20908 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL5A1P20908 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.52□□□□□ -1.85
COL5A1P20908 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL5A1P20908 ANKRD36P1-201ENST00000344424 659 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 HSFY4P-201ENST00000415994 1181 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 DBIP2-201ENST00000419076 262 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC096638.2-201ENST00000434965 711 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL5A1P20908 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 HMGB1P16-201ENST00000447155 540 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.51□□□□□ -1.85
COL5A1P20908 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 EIF1P6-201ENST00000600054 334 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 MRPS35P3-201ENST00000603189 709 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AL713922.2-201ENST00000619384 716 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL5A1P20908 MTND4P26-201ENST00000415971 1359 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.51□□□□□ -1.85
COL5A1P20908 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL5A1P20908 MFSD8-236ENST00000641509 4050 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC063923.1-201ENST00000478982 1619 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL5A1P20908 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 RNF19BPX-201ENST00000426224 625 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC010655.1-201ENST00000449336 292 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.51□□□□□ -1.85
COL5A1P20908 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
COL5A1P20908 AC010285.3-201ENST00000511668 676 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC010342.1-201ENST00000514047 877 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 SUMO2P20-201ENST00000520803 283 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL5A1P20908 SULT1C2P2-201ENST00000562517 294 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.51□□□□□ -1.85
COL5A1P20908 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.51□□□□□ -1.85
COL5A1P20908 KLKP1-201ENST00000595979 403 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
COL5A1P20908 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
COL5A1P20908 AP003392.5-201ENST00000607857 415 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC079298.2-201ENST00000623885 459 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 AC119674.1-212ENST00000641155 993 ntBASIC3.51□□□□□ -1.85
COL5A1P20908 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL5A1P20908 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.51□□□□□ -1.85
COL5A1P20908 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
COL5A1P20908 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL5A1P20908 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
COL5A1P20908 AC000123.3-201ENST00000624029 4975 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL5A1P20908 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
COL5A1P20908 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL5A1P20908 AC139713.2-215ENST00000641428 5037 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 AC092111.2-201ENST00000611627 1414 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL5A1P20908 OR10J6P-201ENST00000289731 930 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 RNU6-301P-201ENST00000384277 107 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL5A1P20908 JKAMPP1-201ENST00000413804 919 ntBASIC3.5□□□□□ -1.85
COL5A1P20908 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.5□□□□□ -1.85
COL5A1P20908 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.5□□□□□ -1.85
COL5A1P20908 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.5□□□□□ -1.85
COL5A1P20908 AC037198.2-201ENST00000478845 733 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms