Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-317P-201ENST00000384031 107 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 MT-TR-201ENST00000387439 65 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NFKB1P19838 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 AL591416.1-201ENST00000404015 867 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC078974.1-201ENST00000411597 223 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 NUP35P1-201ENST00000422734 947 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 DUTP6-201ENST00000425573 462 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.24□□□□□ -1.41
NFKB1P19838 AC012512.1-201ENST00000446594 718 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.24□□□□□ -1.41
NFKB1P19838 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 RPL7P22-201ENST00000466005 733 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC044810.1-201ENST00000480271 711 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC005017.1-201ENST00000482002 490 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 RPL12P30-201ENST00000488389 499 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 AC022616.3-201ENST00000523940 148 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 BNIP3P6-201ENST00000549284 499 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC026464.5-201ENST00000562497 722 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 MIR3118-1-201ENST00000581787 76 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC121334.2-201ENST00000605387 271 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.24□□□□□ -1.41
NFKB1P19838 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 uc_338.29-201ENST00000615099 168 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.24□□□□□ -1.41
NFKB1P19838 AC009318.4-201ENST00000620496 486 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 AC091953.2-201ENST00000623979 160 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NFKB1P19838 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NFKB1P19838 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 USP9YP4-201ENST00000424401 1745 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.24□□□□□ -1.41
NFKB1P19838 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
NFKB1P19838 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 AL049780.3-201ENST00000624612 1583 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC130304.1-201ENST00000622942 2385 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 LARP1BP1-201ENST00000506036 1359 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 AC073343.1-201ENST00000328239 651 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RNU6-1309P-201ENST00000363305 108 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 Y_RNA.395-201ENST00000383945 109 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 SNORD116-29-201ENST00000384516 83 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 DHFRP6-201ENST00000401776 268 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RN7SKP58-201ENST00000411010 305 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC009310.1-201ENST00000414414 451 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 AL356276.2-201ENST00000435919 558 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC104651.2-201ENST00000447549 528 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 MEMO1P4-201ENST00000453590 386 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AL445687.2-201ENST00000458156 728 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AL355032.1-201ENST00000472981 438 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC098818.1-201ENST00000478593 252 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 AL035690.1-201ENST00000490892 383 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RPS27P20-201ENST00000492051 246 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC090958.1-201ENST00000511122 351 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RNU6-559P-201ENST00000516151 98 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RNU6-123P-201ENST00000516163 102 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RNA5SP441-201ENST00000516809 88 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 Y_RNA.718-201ENST00000517110 102 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RN7SKP256-201ENST00000517201 314 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 RNU6-794P-201ENST00000517261 64 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms