Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC3P19447 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
ERCC3P19447 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC3P19447 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
ERCC3P19447 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 AC021242.1-201ENST00000507315 2035 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC3P19447 OR11H4-201ENST00000315409 1082 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 RNU6-1243P-201ENST00000364028 107 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ERCC3P19447 AL024474.1-201ENST00000404655 591 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 OR10T1P-201ENST00000424327 947 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AL022238.1-201ENST00000442557 355 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC002381.1-201ENST00000447049 280 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 VDAC2P4-201ENST00000452925 711 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC099563.1-201ENST00000456086 418 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 SNORD42A-201ENST00000459584 64 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 RN7SL172P-201ENST00000460535 303 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 PABPC1P3-201ENST00000469174 459 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 RPL7P39-201ENST00000481157 744 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 COX6B1P2-201ENST00000489624 230 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 NDUFA5P12-201ENST00000503796 343 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 RPL37P25-201ENST00000507308 276 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC104057.1-201ENST00000515547 497 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC136619.2-201ENST00000563361 631 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC3P19447 TPMTP1-201ENST00000592307 737 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC025857.2-201ENST00000602711 238 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ERCC3P19447 ELL2P4-201ENST00000446870 1376 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC3P19447 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC3P19447 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 AC006378.2-201ENST00000623178 2476 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC3P19447 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERCC3P19447 RNU5A-6P-201ENST00000384136 116 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 MIR223-201ENST00000385204 110 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 AL353597.2-202ENST00000434901 373 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 RPL22P17-201ENST00000438729 315 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 HSPE1P28-201ENST00000443139 211 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 RPL36AP15-201ENST00000444514 266 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 RPL7L1P1-201ENST00000448259 785 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 NANOGNBP1-201ENST00000448444 480 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 BTF3P5-201ENST00000457252 467 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 RPL5P22-201ENST00000480199 884 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 MTND2P33-201ENST00000506452 1031 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC022447.3-201ENST00000506865 495 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC105384.2-201ENST00000508433 640 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC3P19447 OR5AP1P-201ENST00000529730 940 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.5□□□□□ -1.37
ERCC3P19447 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 HAUS8P1-201ENST00000549005 542 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC126615.2-201ENST00000553003 515 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms