Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPS24P12-201ENST00000402084 394 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGA1P17096 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGA1P17096 AL133244.1-201ENST00000456007 258 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
HMGA1P17096 AC113430.1-201ENST00000506872 718 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGA1P17096 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGA1P17096 RN7SKP83-201ENST00000516512 178 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGA1P17096 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGA1P17096 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGA1P17096 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 MIR8058-201ENST00000615737 89 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 AC091953.5-201ENST00000622919 233 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 MIR3651-201ENST00000630427 90 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 AC244205.2-202ENST00000635781 342 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGA1P17096 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGA1P17096 MFSD8-233ENST00000641482 4860 ntBASIC3.64□□□□□ -1.83
HMGA1P17096 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGA1P17096 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGA1P17096 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGA1P17096 MIR23A-201ENST00000385245 73 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 RNA5SP296-201ENST00000410523 111 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 BX323014.1-201ENST00000412876 237 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGA1P17096 AC074367.1-201ENST00000438685 1125 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AF228730.2-201ENST00000438784 848 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGA1P17096 NPM1P17-201ENST00000479221 602 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 RN7SL809P-201ENST00000482040 297 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 RPL23AP73-201ENST00000492507 471 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 CAB39P1-201ENST00000502277 460 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 AP006245.1-201ENST00000522549 120 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AP000926.4-201ENST00000527351 454 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGA1P17096 AC011611.1-201ENST00000552179 197 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AC067852.3-201ENST00000589177 561 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGA1P17096 MIR486-1-201ENST00000612171 68 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGA1P17096 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
HMGA1P17096 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGA1P17096 NCAPGP1-201ENST00000505112 1814 ntBASIC3.63□□□□□ -1.83
HMGA1P17096 AC073073.2-201ENST00000609827 2578 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGA1P17096 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 RPS26P47-201ENST00000427219 348 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 FTLP19-201ENST00000433300 394 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 NPM1P48-201ENST00000436002 853 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 MTND2P25-201ENST00000449028 610 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGA1P17096 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 AC073522.1-201ENST00000483312 377 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 RPL21P13-201ENST00000488305 481 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 HMGB3P14-201ENST00000494195 599 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGA1P17096 SNORA74D-201ENST00000516404 141 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGA1P17096 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGA1P17096 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGA1P17096 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGA1P17096 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGA1P17096 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGA1P17096 AC079880.2-201ENST00000603790 1213 ntBASIC3.62□□□□□ -1.83
HMGA1P17096 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGA1P17096 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGA1P17096 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGA1P17096 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HMGA1P17096 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGA1P17096 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGA1P17096 NMD3P1-201ENST00000439704 1488 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGA1P17096 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGA1P17096 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGA1P17096 OR1AA1P-201ENST00000419597 916 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGA1P17096 HSPE1P27-201ENST00000430808 296 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGA1P17096 AL591503.2-201ENST00000442314 1005 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGA1P17096 AC026427.2-201ENST00000506228 536 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGA1P17096 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms