Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.13□□□□□ -1.91
CD28P10747 SNORA48.9-201ENST00000516419 162 ntBASIC3.13□□□□□ -1.91
CD28P10747 RNU7-143P-201ENST00000516781 65 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.13□□□□□ -1.91
CD28P10747 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.13□□□□□ -1.91
CD28P10747 AC090281.1-201ENST00000523019 276 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.13□□□□□ -1.91
CD28P10747 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.13□□□□□ -1.91
CD28P10747 AC015726.1-201ENST00000602353 681 ntBASIC3.13□□□□□ -1.91
CD28P10747 ABI1P1-201ENST00000603375 1120 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC114878.2-201ENST00000604863 1251 ntBASIC3.13□□□□□ -1.91
CD28P10747 BX322635.1-201ENST00000605804 496 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC100814.1-201ENST00000606963 623 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC015802.5-201ENST00000607478 399 ntBASIC3.13□□□□□ -1.91
CD28P10747 AC103858.2-201ENST00000621471 543 ntBASIC3.13□□□□□ -1.91
CD28P10747 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD28P10747 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD28P10747 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.13□□□□□ -1.91
CD28P10747 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD28P10747 AC114546.3-201ENST00000623582 1734 ntBASIC3.13□□□□□ -1.91
CD28P10747 AL049555.1-201ENST00000562834 1933 ntBASIC3.13□□□□□ -1.91
CD28P10747 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD28P10747 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD28P10747 AL603766.1-201ENST00000407763 664 ntBASIC3.12□□□□□ -1.91
CD28P10747 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.12□□□□□ -1.91
CD28P10747 RWDD4P2-201ENST00000426392 563 ntBASIC3.12□□□□□ -1.91
CD28P10747 NPM1P24-201ENST00000428039 894 ntBASIC3.12□□□□□ -1.91
CD28P10747 AL160175.1-201ENST00000428124 247 ntBASIC3.12□□□□□ -1.91
CD28P10747 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CD28P10747 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD28P10747 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CD28P10747 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 AL358232.1-201ENST00000448030 501 ntBASIC3.12□□□□□ -1.91
CD28P10747 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 AC022034.3-201ENST00000471393 478 ntBASIC3.12□□□□□ -1.91
CD28P10747 PPIAP15-201ENST00000479662 484 ntBASIC3.12□□□□□ -1.91
CD28P10747 RWDD4P1-201ENST00000488019 565 ntBASIC3.12□□□□□ -1.91
CD28P10747 AC090543.1-201ENST00000492168 485 ntBASIC3.12□□□□□ -1.91
CD28P10747 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 RN7SL323P-201ENST00000494712 295 ntBASIC3.12□□□□□ -1.91
CD28P10747 PRELID3BP7-201ENST00000503606 469 ntBASIC3.12□□□□□ -1.91
CD28P10747 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 RN7SKP141-201ENST00000516167 338 ntBASIC3.12□□□□□ -1.91
CD28P10747 RNA5SP179-201ENST00000517284 121 ntBASIC3.12□□□□□ -1.91
CD28P10747 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 TRMT10BP1-201ENST00000519377 943 ntBASIC3.12□□□□□ -1.91
CD28P10747 AC091516.1-201ENST00000549191 703 ntBASIC3.12□□□□□ -1.91
CD28P10747 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 HNRNPCP4-201ENST00000571636 900 ntBASIC3.12□□□□□ -1.91
CD28P10747 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 MIR4444-1-201ENST00000581696 74 ntBASIC3.12□□□□□ -1.91
CD28P10747 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 MIR4444-2-201ENST00000584390 74 ntBASIC3.12□□□□□ -1.91
CD28P10747 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.12□□□□□ -1.91
CD28P10747 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 AC007423.1-201ENST00000605009 627 ntBASIC3.12□□□□□ -1.91
CD28P10747 AC091167.4-201ENST00000605079 184 ntBASIC3.12□□□□□ -1.91
CD28P10747 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.12□□□□□ -1.91
CD28P10747 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 RMST_9.1-201ENST00000619945 193 ntBASIC3.12□□□□□ -1.91
CD28P10747 MIR7702-201ENST00000621931 59 ntBASIC3.12□□□□□ -1.91
CD28P10747 FP236240.3-201ENST00000623061 327 ntBASIC3.12□□□□□ -1.91
CD28P10747 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD28P10747 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD28P10747 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.12□□□□□ -1.91
CD28P10747 AC007390.2-201ENST00000606229 3803 ntBASIC3.12□□□□□ -1.91
CD28P10747 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CD28P10747 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD28P10747 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.11□□□□□ -1.91
CD28P10747 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.11□□□□□ -1.91
CD28P10747 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD28P10747 AL139811.1-201ENST00000424779 2299 ntBASIC3.11□□□□□ -1.91
CD28P10747 OR4A15-201ENST00000314706 1035 ntBASIC3.11□□□□□ -1.91
CD28P10747 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD28P10747 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
CD28P10747 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD28P10747 RNU4-31P-201ENST00000384211 141 ntBASIC3.11□□□□□ -1.91
CD28P10747 AL589655.1-201ENST00000405398 482 ntBASIC3.11□□□□□ -1.91
CD28P10747 PGBD4P8-201ENST00000412993 562 ntBASIC3.11□□□□□ -1.91
CD28P10747 AC092647.1-201ENST00000420654 287 ntBASIC3.11□□□□□ -1.91
CD28P10747 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD28P10747 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.11□□□□□ -1.91
CD28P10747 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.11□□□□□ -1.91
CD28P10747 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.11□□□□□ -1.91
CD28P10747 TRIM60P13-201ENST00000432350 1283 ntBASIC3.11□□□□□ -1.91
CD28P10747 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.11□□□□□ -1.91
CD28P10747 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.11□□□□□ -1.91
CD28P10747 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.11□□□□□ -1.91
CD28P10747 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CD28P10747 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.11□□□□□ -1.91
CD28P10747 AL133547.1-201ENST00000448546 220 ntBASIC3.11□□□□□ -1.91
CD28P10747 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.11□□□□□ -1.91
CD28P10747 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.11□□□□□ -1.91
CD28P10747 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms