Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PTGES3P3-201ENST00000511479 482 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBCP0CG48 RN7SKP141-201ENST00000516167 338 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 HAUS1P3-201ENST00000523909 662 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.56□□□□□ -1.84
UBCP0CG48 NOP56P3-201ENST00000549457 385 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.56□□□□□ -1.84
UBCP0CG48 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
UBCP0CG48 CENPUP2-201ENST00000555897 1186 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AC022968.1-201ENST00000567372 442 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.56□□□□□ -1.84
UBCP0CG48 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.56□□□□□ -1.84
UBCP0CG48 MIR5684-201ENST00000585074 65 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 AC114878.2-201ENST00000604863 1251 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 AC112503.1-201ENST00000608436 391 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.56□□□□□ -1.84
UBCP0CG48 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.56□□□□□ -1.84
UBCP0CG48 AC022079.2-201ENST00000619739 566 ntBASIC3.56□□□□□ -1.84
UBCP0CG48 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBCP0CG48 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBCP0CG48 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.56□□□□□ -1.84
UBCP0CG48 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBCP0CG48 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBCP0CG48 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBCP0CG48 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
UBCP0CG48 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 RNU4-39P-201ENST00000362455 127 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBCP0CG48 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBCP0CG48 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBCP0CG48 HMGB1P13-201ENST00000406019 642 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 RFESDP1-201ENST00000422350 461 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.55□□□□□ -1.84
UBCP0CG48 CNOT7P1-201ENST00000429006 852 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC006011.1-201ENST00000442758 349 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 RPL35AP28-201ENST00000459730 331 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 RN7SL610P-201ENST00000463845 291 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 USP9YP5-201ENST00000511770 630 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 SNORA31.13-201ENST00000516624 135 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC008802.1-201ENST00000519121 791 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.55□□□□□ -1.84
UBCP0CG48 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.55□□□□□ -1.84
UBCP0CG48 AC025260.1-201ENST00000548858 430 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC074029.1-201ENST00000552531 1044 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.55□□□□□ -1.84
UBCP0CG48 AL161729.3-201ENST00000603533 673 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 AC016717.3-201ENST00000624730 554 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UBCP0CG48 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
UBCP0CG48 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
UBCP0CG48 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBCP0CG48 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
UBCP0CG48 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
UBCP0CG48 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UBCP0CG48 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
UBCP0CG48 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 DNAJC19P6-201ENST00000401853 280 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 RNU2-21P-201ENST00000410368 188 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC011933.1-201ENST00000413334 321 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 BMS1P19-201ENST00000433925 393 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.54□□□□□ -1.84
UBCP0CG48 RPL29P29-201ENST00000448725 423 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms