Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.35□□□□□ -1.87
CD74P04233 MRPS33P4-201ENST00000434892 317 ntBASIC3.35□□□□□ -1.87
CD74P04233 ELOCP3-201ENST00000439303 348 ntBASIC3.35□□□□□ -1.87
CD74P04233 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
CD74P04233 AL627224.1-201ENST00000448334 444 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.35□□□□□ -1.87
CD74P04233 PPIAP3-201ENST00000450588 505 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC098824.1-201ENST00000453565 980 ntBASIC3.35□□□□□ -1.87
CD74P04233 TVP23BP2-201ENST00000455082 615 ntBASIC3.35□□□□□ -1.87
CD74P04233 CEACAMP4-201ENST00000457676 421 ntBASIC3.35□□□□□ -1.87
CD74P04233 TMED11P-201ENST00000479478 690 ntBASIC3.35□□□□□ -1.87
CD74P04233 RN7SL459P-201ENST00000481078 302 ntBASIC3.35□□□□□ -1.87
CD74P04233 CDH12P2-201ENST00000504393 298 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.35□□□□□ -1.87
CD74P04233 IGBP1P5-201ENST00000507524 1000 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
CD74P04233 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.35□□□□□ -1.87
CD74P04233 AC010285.3-201ENST00000511668 676 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC023141.12-201ENST00000512399 199 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.35□□□□□ -1.87
CD74P04233 C1GALT1P3-201ENST00000522049 819 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.35□□□□□ -1.87
CD74P04233 OR8G5-201ENST00000524943 1041 ntBASIC3.35□□□□□ -1.87
CD74P04233 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.35□□□□□ -1.87
CD74P04233 AL121576.1-201ENST00000556055 276 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC090877.1-201ENST00000561418 344 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC025627.2-201ENST00000576220 160 ntBASIC3.35□□□□□ -1.87
CD74P04233 BRDTP1-201ENST00000605735 677 ntBASIC3.35□□□□□ -1.87
CD74P04233 AL023583.1-201ENST00000607518 1143 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC103710.3-201ENST00000608157 948 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC012531.5-201ENST00000611375 151 ntBASIC3.35□□□□□ -1.87
CD74P04233 MIR7973-1-201ENST00000614683 76 ntBASIC3.35□□□□□ -1.87
CD74P04233 MIR7151-201ENST00000617477 60 ntBASIC3.35□□□□□ -1.87
CD74P04233 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.35□□□□□ -1.87
CD74P04233 ATE1-AS1-202ENST00000636460 506 ntBASIC3.35□□□□□ -1.87
CD74P04233 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CD74P04233 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CD74P04233 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CD74P04233 SNORA60-201ENST00000362396 134 ntBASIC3.34□□□□□ -1.87
CD74P04233 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.34□□□□□ -1.87
CD74P04233 HMGB3P19-201ENST00000403971 560 ntBASIC3.34□□□□□ -1.87
CD74P04233 RN7SKP182-201ENST00000410772 298 ntBASIC3.34□□□□□ -1.87
CD74P04233 RPEP3-201ENST00000425462 676 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 RPS17P13-201ENST00000448974 407 ntBASIC3.34□□□□□ -1.87
CD74P04233 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 RPL7P32-201ENST00000457119 744 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC092691.2-201ENST00000461787 803 ntBASIC3.34□□□□□ -1.87
CD74P04233 RN7SL810P-201ENST00000493031 276 ntBASIC3.34□□□□□ -1.87
CD74P04233 AP001086.1-201ENST00000494882 321 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.34□□□□□ -1.87
CD74P04233 RN7SKP83-201ENST00000516512 178 ntBASIC3.34□□□□□ -1.87
CD74P04233 HIGD1AP18-201ENST00000520730 278 ntBASIC3.34□□□□□ -1.87
CD74P04233 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.34□□□□□ -1.87
CD74P04233 OR4U1P-201ENST00000554958 912 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.34□□□□□ -1.87
CD74P04233 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.34□□□□□ -1.87
CD74P04233 MIMT1-201ENST00000597105 1050 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.34□□□□□ -1.87
CD74P04233 LLPHP1-201ENST00000603571 367 ntBASIC3.34□□□□□ -1.87
CD74P04233 AP004372.1-201ENST00000604842 844 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC006946.3-201ENST00000609791 756 ntBASIC3.34□□□□□ -1.87
CD74P04233 AC091905.1-201ENST00000624400 311 ntBASIC3.34□□□□□ -1.87
CD74P04233 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD74P04233 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.34□□□□□ -1.87
CD74P04233 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.34□□□□□ -1.88
CD74P04233 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CD74P04233 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CD74P04233 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.34□□□□□ -1.88
CD74P04233 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CD74P04233 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CD74P04233 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CD74P04233 CEP170P1-201ENST00000502249 4587 ntBASIC3.33□□□□□ -1.88
CD74P04233 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.33□□□□□ -1.88
CD74P04233 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CD74P04233 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CD74P04233 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CD74P04233 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CD74P04233 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.33□□□□□ -1.88
CD74P04233 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CD74P04233 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms