Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC105313.1-201ENST00000509121 353 ntBASIC4.42□□□□□ -1.7
LDLRP01130 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 NDUFB4P12-201ENST00000513465 390 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 AP001207.2-201ENST00000519490 539 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.42□□□□□ -1.7
LDLRP01130 AC084824.1-201ENST00000550917 1005 ntBASIC4.42□□□□□ -1.7
LDLRP01130 KPNA2P3-201ENST00000584190 848 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 AC008759.1-201ENST00000589783 983 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.42□□□□□ -1.7
LDLRP01130 AP001160.4-201ENST00000596971 382 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 AL451086.1-201ENST00000605596 223 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC079395.3-201ENST00000615161 484 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AL161637.1-201ENST00000622380 412 ntBASIC4.42□□□□□ -1.7
LDLRP01130 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 AP003399.1-201ENST00000637534 361 ntBASIC4.42□□□□□ -1.7
LDLRP01130 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
LDLRP01130 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 AC022893.2-201ENST00000564832 3296 ntBASIC4.41□□□□□ -1.7
LDLRP01130 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LDLRP01130 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
LDLRP01130 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LDLRP01130 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LDLRP01130 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 MIR525-201ENST00000384978 85 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AL049697.2-201ENST00000403708 294 ntBASIC4.41□□□□□ -1.7
LDLRP01130 BTF3P8-201ENST00000414577 526 ntBASIC4.41□□□□□ -1.7
LDLRP01130 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 OSTCP5-201ENST00000425293 453 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC092648.1-201ENST00000425870 423 ntBASIC4.41□□□□□ -1.7
LDLRP01130 RPL12P28-201ENST00000430852 489 ntBASIC4.41□□□□□ -1.7
LDLRP01130 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 HMGB1P45-201ENST00000435986 653 ntBASIC4.41□□□□□ -1.7
LDLRP01130 ARL2BPP10-201ENST00000446487 531 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 AL162388.1-201ENST00000450912 352 ntBASIC4.41□□□□□ -1.7
LDLRP01130 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.41□□□□□ -1.7
LDLRP01130 AC005912.1-201ENST00000495392 255 ntBASIC4.41□□□□□ -1.7
LDLRP01130 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
LDLRP01130 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 AC093840.1-201ENST00000511599 336 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 RNA5SP446-201ENST00000515955 82 ntBASIC4.41□□□□□ -1.7
LDLRP01130 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
LDLRP01130 RNU6-1028P-201ENST00000517164 93 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC090151.1-201ENST00000520784 730 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC104417.1-201ENST00000523974 751 ntBASIC4.41□□□□□ -1.7
LDLRP01130 NDUFS5P6-201ENST00000529136 295 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC087897.1-201ENST00000550134 156 ntBASIC4.41□□□□□ -1.7
LDLRP01130 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.41□□□□□ -1.7
LDLRP01130 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 AL365400.2-201ENST00000605604 902 ntBASIC4.41□□□□□ -1.7
LDLRP01130 MIR92B-201ENST00000607575 96 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AC139769.3-201ENST00000618383 175 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AL121594.5-201ENST00000631724 573 ntBASIC4.41□□□□□ -1.7
LDLRP01130 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.41□□□□□ -1.7
LDLRP01130 ATE1-AS1-202ENST00000636460 506 ntBASIC4.41□□□□□ -1.7
LDLRP01130 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 TLK1P1-201ENST00000456760 2440 ntBASIC4.41□□□□□ -1.7
LDLRP01130 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LDLRP01130 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.41□□□□□ -1.7
LDLRP01130 AL445523.1-201ENST00000451184 1362 ntBASIC4.4□□□□□ -1.7
LDLRP01130 AL049555.1-201ENST00000562834 1933 ntBASIC4.4□□□□□ -1.7
LDLRP01130 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LDLRP01130 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LDLRP01130 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms