Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 AL365396.1-201ENST00000430854 671 ntBASIC4.54□□□□□ -1.68
LDB2O43679 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 RPL23AP93-201ENST00000440847 484 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC104978.1-201ENST00000449387 391 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AL133217.1-201ENST00000450980 425 ntBASIC4.54□□□□□ -1.68
LDB2O43679 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 TRBV8-2-201ENST00000475637 270 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC073522.1-201ENST00000483312 377 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 AC084024.2-201ENST00000503480 791 ntBASIC4.54□□□□□ -1.68
LDB2O43679 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 AC023632.1-201ENST00000518463 375 ntBASIC4.54□□□□□ -1.68
LDB2O43679 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 AP003461.1-201ENST00000528866 78 ntBASIC4.54□□□□□ -1.68
LDB2O43679 PDCL2P2-201ENST00000533651 189 ntBASIC4.54□□□□□ -1.68
LDB2O43679 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 NBEAP1-201ENST00000554452 979 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC087465.1-201ENST00000560574 245 ntBASIC4.54□□□□□ -1.68
LDB2O43679 MIR4666A-201ENST00000580160 79 ntBASIC4.54□□□□□ -1.68
LDB2O43679 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 VN1R88P-201ENST00000596787 292 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC018638.7-201ENST00000605836 1114 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AL450489.1-201ENST00000612071 468 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC107075.1-201ENST00000613695 314 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC009318.3-201ENST00000616916 503 ntBASIC4.54□□□□□ -1.68
LDB2O43679 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 AP003497.2-201ENST00000624220 967 ntBASIC4.54□□□□□ -1.68
LDB2O43679 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.54□□□□□ -1.68
LDB2O43679 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
LDB2O43679 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 AL513185.3-201ENST00000433335 1300 ntBASIC4.53□□□□□ -1.68
LDB2O43679 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
LDB2O43679 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 RNU1-32P-201ENST00000363937 159 ntBASIC4.53□□□□□ -1.68
LDB2O43679 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.53□□□□□ -1.68
LDB2O43679 Y_RNA.465-201ENST00000384293 102 ntBASIC4.53□□□□□ -1.68
LDB2O43679 SNORA11C-201ENST00000408532 129 ntBASIC4.53□□□□□ -1.68
LDB2O43679 RNU6-77P-201ENST00000410554 91 ntBASIC4.53□□□□□ -1.68
LDB2O43679 RN7SKP167-201ENST00000411047 285 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 AC073143.1-201ENST00000436316 395 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 HMGB1P48-201ENST00000446155 598 ntBASIC4.53□□□□□ -1.68
LDB2O43679 RPL23AP43-201ENST00000446445 471 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC022431.1-201ENST00000450941 438 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 MRPL42P4-201ENST00000453267 443 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.53□□□□□ -1.68
LDB2O43679 AC011979.1-201ENST00000472300 483 ntBASIC4.53□□□□□ -1.68
LDB2O43679 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.53□□□□□ -1.68
LDB2O43679 DEFB109F-201ENST00000491870 277 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC118282.2-201ENST00000508739 374 ntBASIC4.53□□□□□ -1.68
LDB2O43679 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
LDB2O43679 NDUFB4P12-201ENST00000513465 390 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.53□□□□□ -1.68
LDB2O43679 C1GALT1P3-201ENST00000522049 819 ntBASIC4.53□□□□□ -1.68
LDB2O43679 IGJP1-201ENST00000522682 475 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.53□□□□□ -1.68
LDB2O43679 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 AP001781.1-201ENST00000530977 207 ntBASIC4.53□□□□□ -1.68
LDB2O43679 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 AC010198.2-201ENST00000550612 259 ntBASIC4.53□□□□□ -1.68
LDB2O43679 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.53□□□□□ -1.68
LDB2O43679 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 NIFKP8-201ENST00000560500 874 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 AC068790.4-201ENST00000602474 263 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC023813.4-201ENST00000607580 580 ntBASIC4.53□□□□□ -1.68
LDB2O43679 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 VIS1.1-201ENST00000610517 203 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms