Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PROM1O43490 AC000374.1-201ENST00000434698 1745 ntBASIC4.95□□□□□ -1.62
PROM1O43490 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.95□□□□□ -1.62
PROM1O43490 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 RNU4-21P-201ENST00000362802 126 ntBASIC4.95□□□□□ -1.62
PROM1O43490 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
PROM1O43490 RNA5SP90-201ENST00000364801 99 ntBASIC4.95□□□□□ -1.62
PROM1O43490 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 MIR550A3-201ENST00000390735 95 ntBASIC4.95□□□□□ -1.62
PROM1O43490 DEFB108C-201ENST00000400154 252 ntBASIC4.95□□□□□ -1.62
PROM1O43490 USP9YP33-201ENST00000412220 421 ntBASIC4.95□□□□□ -1.62
PROM1O43490 Z99497.1-201ENST00000421282 135 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC108075.1-201ENST00000424692 529 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL590762.4-201ENST00000425885 253 ntBASIC4.95□□□□□ -1.62
PROM1O43490 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 RPL21P110-201ENST00000433345 446 ntBASIC4.95□□□□□ -1.62
PROM1O43490 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.95□□□□□ -1.62
PROM1O43490 AC092641.1-201ENST00000440229 772 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 COX6CP18-201ENST00000448769 222 ntBASIC4.95□□□□□ -1.62
PROM1O43490 OR6C5P-201ENST00000452388 923 ntBASIC4.95□□□□□ -1.62
PROM1O43490 RPL5P32-201ENST00000454085 879 ntBASIC4.95□□□□□ -1.62
PROM1O43490 MTCYBP1-201ENST00000454315 1119 ntBASIC4.95□□□□□ -1.62
PROM1O43490 SNRPGP9-201ENST00000456025 225 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 AC005229.2-201ENST00000456995 399 ntBASIC4.95□□□□□ -1.62
PROM1O43490 PPIAP21-201ENST00000464473 501 ntBASIC4.95□□□□□ -1.62
PROM1O43490 RN7SL189P-201ENST00000468631 289 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 AC109458.1-201ENST00000508858 316 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 CDC42P4-201ENST00000510507 563 ntBASIC4.95□□□□□ -1.62
PROM1O43490 RNU6-347P-201ENST00000516658 105 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC012400.1-201ENST00000518452 381 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL139174.1-201ENST00000531489 886 ntBASIC4.95□□□□□ -1.62
PROM1O43490 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
PROM1O43490 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.95□□□□□ -1.62
PROM1O43490 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 AC245505.1-201ENST00000556398 224 ntBASIC4.95□□□□□ -1.62
PROM1O43490 BPTFP1-201ENST00000579209 492 ntBASIC4.95□□□□□ -1.62
PROM1O43490 RN7SL708P-201ENST00000580952 299 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC107982.3-201ENST00000584957 985 ntBASIC4.95□□□□□ -1.62
PROM1O43490 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.95□□□□□ -1.62
PROM1O43490 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 AC087683.1-201ENST00000591187 441 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL390838.2-201ENST00000602394 274 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AL136363.2-201ENST00000604173 851 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC133552.5-201ENST00000604266 540 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC239868.4-201ENST00000608318 671 ntBASIC4.95□□□□□ -1.62
PROM1O43490 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.95□□□□□ -1.62
PROM1O43490 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 AC073534.2-201ENST00000620377 381 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC068870.2-201ENST00000620635 389 ntBASIC4.95□□□□□ -1.62
PROM1O43490 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.95□□□□□ -1.62
PROM1O43490 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 AC092192.1-201ENST00000633154 1018 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC068137.3-201ENST00000639191 341 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 AC073869.6-201ENST00000640656 341 ntBASIC4.95□□□□□ -1.62
PROM1O43490 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
PROM1O43490 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 AL118496.1-201ENST00000440201 1812 ntBASIC4.95□□□□□ -1.62
PROM1O43490 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 RNU6-500P-201ENST00000362349 107 ntBASIC4.94□□□□□ -1.62
PROM1O43490 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PROM1O43490 AL161909.1-201ENST00000397390 712 ntBASIC4.94□□□□□ -1.62
PROM1O43490 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.94□□□□□ -1.62
PROM1O43490 FCF1P9-201ENST00000412546 282 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.94□□□□□ -1.62
PROM1O43490 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.94□□□□□ -1.62
PROM1O43490 RPL34P6-201ENST00000432390 345 ntBASIC4.94□□□□□ -1.62
PROM1O43490 OR2B8P-201ENST00000432841 938 ntBASIC4.94□□□□□ -1.62
PROM1O43490 RPS20P1-201ENST00000434853 354 ntBASIC4.94□□□□□ -1.62
PROM1O43490 USP9YP35-201ENST00000435696 412 ntBASIC4.94□□□□□ -1.62
PROM1O43490 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.94□□□□□ -1.62
PROM1O43490 AL357520.1-201ENST00000441557 453 ntBASIC4.94□□□□□ -1.62
PROM1O43490 MTND4P18-201ENST00000447010 465 ntBASIC4.94□□□□□ -1.62
PROM1O43490 PRPF38AP1-201ENST00000451976 933 ntBASIC4.94□□□□□ -1.62
PROM1O43490 Z92846.1-201ENST00000456203 268 ntBASIC4.94□□□□□ -1.62
PROM1O43490 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms