Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CDY23P-201ENST00000451661 1014 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CYCSP20-201ENST00000473154 315 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC090013.1-201ENST00000485147 480 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC106872.2-201ENST00000494303 480 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 OR5H3P-201ENST00000502817 919 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 ATP1B1P1-201ENST00000509767 915 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC021146.3-201ENST00000511911 260 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RNU6-467P-201ENST00000517027 110 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 HMGB1P23-201ENST00000518743 568 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 MTND1P36-201ENST00000522384 936 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC113192.3-201ENST00000529152 742 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 TRAV8-5-201ENST00000537369 341 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC084824.1-201ENST00000550917 1005 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC025884.1-201ENST00000556034 378 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 BNIP3P5-201ENST00000562290 498 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC093510.2-201ENST00000562820 896 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC015911.5-201ENST00000587076 451 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC008759.1-201ENST00000589783 983 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC083899.3-201ENST00000603413 594 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC084824.5-201ENST00000612009 413 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 MIR8084-201ENST00000614105 89 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL138721.1-201ENST00000616756 179 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 MIR6891-201ENST00000618788 93 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 MTCO1P18-201ENST00000455518 1419 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP27-201ENST00000363839 119 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 RNU6-609P-201ENST00000365459 107 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 SNORA57.1-201ENST00000391227 145 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 SNORA74C-2-201ENST00000411179 201 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 EIF4EP1-201ENST00000422311 642 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 MTCO1P43-201ENST00000431831 488 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 EXTL2P1-201ENST00000446218 416 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 SNRPGP5-201ENST00000456003 220 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC110792.2-201ENST00000510278 224 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 FTH1P9-201ENST00000513251 355 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 RNU6-334P-201ENST00000517072 102 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 RN7SKP283-201ENST00000517197 270 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 OR5BC1P-201ENST00000529327 739 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC027104.1-201ENST00000563702 681 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 MTND4LP25-201ENST00000570218 163 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC010201.1-201ENST00000605051 540 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC010680.4-201ENST00000605334 543 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC026741.1-201ENST00000605892 482 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC245100.7-201ENST00000609678 442 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC024941.1-201ENST00000612250 334 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 STMN1P1-201ENST00000617809 440 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms