Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL512427.1-201ENST00000618593 349 ntBASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 MIR6806-201ENST00000622141 64 ntBASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 AC097504.1-201ENST00000515103 2415 ntBASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 AC024560.2-201ENST00000507981 1497 ntBASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 AP001148.1-201ENST00000624124 2359 ntBASIC4.79□□□□□ -1.64
HMGB1P1B2RPK0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL136164.3-201ENST00000624429 3978 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-492P-201ENST00000363035 104 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 RN7SKP171-201ENST00000364417 303 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 RN7SKP275-201ENST00000364626 301 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 DEFB109C-201ENST00000382575 264 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 DEFB109B-201ENST00000382656 264 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 SDCBPP2-201ENST00000424643 885 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 Z93242.1-201ENST00000427102 353 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC092634.2-201ENST00000428146 1010 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 PSMD10P3-201ENST00000437000 448 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 RABEPKP1-201ENST00000440529 1026 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL353748.1-201ENST00000440753 474 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC007998.1-201ENST00000474156 672 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 VPS26AP1-201ENST00000483197 979 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL512624.1-201ENST00000613638 469 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC008083.4-201ENST00000615076 444 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 AL683826.1-201ENST00000624104 627 ntBASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMGB1P1B2RPK0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AL645568.2-201ENST00000432815 1337 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 HMGB1P5-201ENST00000255320 642 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 OR6K3-202ENST00000368146 996 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 SNORA51.6-201ENST00000384151 125 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 RNU6-328P-201ENST00000390887 106 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AL161909.1-201ENST00000397390 712 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 RNU6-712P-201ENST00000410558 100 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC092447.6-201ENST00000414578 210 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC007390.1-201ENST00000415722 356 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 RPS7P15-201ENST00000415804 584 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 UBTFL3-201ENST00000418934 1024 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC004552.1-201ENST00000419089 348 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC093698.1-201ENST00000423843 571 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC012497.1-201ENST00000429392 575 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 ARL4AP4-201ENST00000434170 518 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC012075.1-201ENST00000436549 580 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC092393.1-201ENST00000439625 742 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 snoU13.4-201ENST00000458916 104 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 RPS26P3-201ENST00000470205 348 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 UBTFL6-201ENST00000477929 1024 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC013828.1-201ENST00000481845 158 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC090543.2-201ENST00000483963 348 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC004057.1-201ENST00000485827 348 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 MRPS5P3-201ENST00000515577 166 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 RN7SKP260-201ENST00000516907 149 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC104417.1-201ENST00000523974 751 ntBASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P1B2RPK0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms