Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.54□□□□□ -1.68
RGPD3A6NKT7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 RNU1-108P-201ENST00000362556 161 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 RNU1-18P-201ENST00000363062 164 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 SDCBPP2-201ENST00000424643 885 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 AL158071.1-201ENST00000430315 461 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 AC011742.1-201ENST00000431448 434 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 OR2A20P-203ENST00000498397 1268 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 AC090877.1-201ENST00000561418 344 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 U4.6-201ENST00000621618 127 ntBASIC4.53□□□□□ -1.68
RGPD3A6NKT7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RGPD3A6NKT7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 RNA5SP52-201ENST00000362448 134 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 NPM1P38-201ENST00000403835 865 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 HDGFP1-201ENST00000405943 252 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 RN7SKP199-201ENST00000410325 305 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 AL024507.1-201ENST00000412741 274 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 GSTM3P2-201ENST00000412746 530 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 HMGB1P21-201ENST00000502313 581 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 FTH1P24-201ENST00000503502 462 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 AC138409.2-202ENST00000507274 458 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 FCF1P8-201ENST00000510322 597 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 MIR7106-201ENST00000612419 65 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.53□□□□□ -1.69
RGPD3A6NKT7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RGPD3A6NKT7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AC005183.1-201ENST00000603687 1979 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 SAGE4P-201ENST00000442271 3381 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 RNA5SP197-201ENST00000363357 119 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 RNU6-729P-201ENST00000384399 107 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AL136131.1-201ENST00000406079 803 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 BX323014.1-201ENST00000412876 237 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AC113192.3-201ENST00000529152 742 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 MIR3162-201ENST00000581818 82 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.52□□□□□ -1.69
RGPD3A6NKT7 AC018529.3-201ENST00000624212 2254 ntBASIC4.52□□□□□ -1.69
RGPD3A6NKT7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 OR51C1P-202ENST00000641159 1444 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 RHOT1P2-201ENST00000366423 333 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC110794.1-201ENST00000505816 425 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 CR383656.14-201ENST00000551951 406 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC127502.3-201ENST00000636170 1206 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 AC011503.2-201ENST00000594230 1500 ntBASIC4.51□□□□□ -1.69
RGPD3A6NKT7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RGPD3A6NKT7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 FTLP6-201ENST00000355274 422 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 RNU6-7-201ENST00000364784 107 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 RNU6-8-201ENST00000365467 107 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 NACAP7-201ENST00000407371 609 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms