Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 Y_RNA.25-201ENST00000362528 102 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 RNA5SP88-201ENST00000365560 109 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 RNA5SP284-201ENST00000384547 118 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 NCSTNP1-201ENST00000406229 144 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MTCYBP38-201ENST00000417160 1123 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC093698.1-201ENST00000423843 571 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 OR2B8P-201ENST00000432841 938 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL512286.1-201ENST00000439244 400 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 SSXP1-201ENST00000453640 473 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 ARPC3P2-201ENST00000457786 533 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MTND6P2-201ENST00000512226 524 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC027309.2-201ENST00000520566 192 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC022360.1-201ENST00000521058 340 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC079600.1-201ENST00000550326 297 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 PSMB7P1-201ENST00000556349 514 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC012146.2-201ENST00000576545 416 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MTND1P15-201ENST00000579262 949 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 RN7SL753P-201ENST00000581238 290 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC091488.1-201ENST00000604239 660 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 NDUFA8P1-201ENST00000605525 367 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC108747.1-201ENST00000609508 535 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC068944.2-201ENST00000610373 403 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC008498.1-201ENST00000613012 531 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MIR6862-1-201ENST00000613016 70 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 MIR6862-2-201ENST00000614755 70 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL121890.2-201ENST00000617644 465 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 BX005214.3-202ENST00000619809 325 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AP001005.3-201ENST00000622049 129 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC120349.2-201ENST00000625002 298 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AC022031.1-201ENST00000585985 2593 ntBASIC5.68□□□□□ -1.5
CCDC66A2RUB6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC66A2RUB6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC114786.1-201ENST00000512892 1415 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL450345.1-202ENST00000605741 3881 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 FGF7P2-201ENST00000332473 296 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 SNORA17A-201ENST00000391185 133 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC136624.1-201ENST00000400791 413 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL589647.1-201ENST00000402485 466 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL121834.1-202ENST00000404494 277 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC022028.1-201ENST00000412054 408 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 FCF1P2-201ENST00000415284 583 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC092634.6-201ENST00000418558 192 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 LINC00993-201ENST00000420453 540 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 MTCO3P1-205ENST00000422088 832 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 EPS15P1-201ENST00000448836 336 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 DNAJC19P1-201ENST00000455312 319 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 NF1P3-201ENST00000457709 450 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 TPT1P7-201ENST00000458300 517 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 RPL30P9-201ENST00000465586 330 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 HMGN2P25-201ENST00000486956 268 ntBASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC66A2RUB6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms