Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 OR10T1P-201ENST00000424327 947 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 TMX2P1-201ENST00000436507 708 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 VN1R10P-201ENST00000447106 875 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC005726.1-201ENST00000494679 427 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MTCYBP17-201ENST00000503579 789 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 Y_RNA.695-201ENST00000516715 107 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC022790.1-201ENST00000522872 204 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 HMGB1P40-201ENST00000525121 540 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 CYCSP2-201ENST00000558168 301 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 PCMTD1P2-201ENST00000565017 355 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MTCYBP28-201ENST00000566728 1132 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4504-201ENST00000577413 92 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4637-201ENST00000582405 84 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC011477.5-201ENST00000586571 259 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AL159169.3-201ENST00000608871 561 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC010632.3-201ENST00000611377 369 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 ERCC6-202ENST00000374127 1782 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL23P2-201ENST00000320371 421 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 SNORD116-4-201ENST00000384733 96 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 SNRPEP2-201ENST00000397592 279 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF603P-201ENST00000405613 487 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 TPMTP3-201ENST00000411928 735 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AL358176.3-201ENST00000420757 454 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC007161.1-204ENST00000423039 460 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 COX6CP15-201ENST00000426313 211 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AL117351.1-201ENST00000438864 766 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 RPS11P7-201ENST00000442125 465 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 NDUFA12P1-201ENST00000455914 406 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 FAM172BP-201ENST00000487497 1089 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC006499.5-201ENST00000505037 514 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC104057.1-201ENST00000515547 497 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SKP82-201ENST00000516786 223 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AP000676.2-201ENST00000529711 301 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC008127.2-201ENST00000549925 1075 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 HSPE1P3-201ENST00000559254 309 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC136618.2-201ENST00000575091 400 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4646-201ENST00000580775 63 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC008507.1-201ENST00000587506 734 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 BNIP3P11-201ENST00000603878 563 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AC015908.5-201ENST00000623289 343 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 AL359715.5-201ENST00000623431 443 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01355-201ENST00000566551 5444 ntBASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA3Q9Y5H0 MAPK10-349ENST00000641767 3661 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms