Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS4AQ9UN37 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 DCAF13P3-201ENST00000561147 1334 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 SNURFL-201ENST00000309296 343 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RNU6-839P-201ENST00000363347 108 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RNA5SP87-201ENST00000384155 118 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 SNORA51.12-201ENST00000384448 134 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC119751.6-201ENST00000416712 186 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC009302.1-201ENST00000417147 390 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC098592.1-201ENST00000419352 333 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC048351.1-201ENST00000420064 602 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 MRPS36P1-201ENST00000421291 307 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 DPRXP1-201ENST00000426312 460 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC016712.1-201ENST00000431088 378 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC011753.3-201ENST00000443436 406 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC243772.1-201ENST00000451620 410 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC097262.1-201ENST00000452559 548 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RN7SL443P-201ENST00000464331 290 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RN7SL354P-201ENST00000469282 294 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RN7SL441P-201ENST00000492388 296 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC073073.1-201ENST00000493920 463 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ARL4AP1-201ENST00000503220 705 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC111000.2-201ENST00000507775 550 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RN7SKP31-201ENST00000516354 278 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RNA5SP135-201ENST00000517019 125 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ELOCP32-201ENST00000548625 324 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC090616.2-202ENST00000584248 222 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AL031281.1-201ENST00000604049 488 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AL592221.1-201ENST00000605266 382 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AC124312.4-201ENST00000605533 310 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 AL353600.1-201ENST00000608148 251 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4AQ9UN37 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL022393.1-201ENST00000625142 1677 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 OR52E6-202ENST00000379946 954 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 Y_RNA.408-201ENST00000383987 102 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 RNU6-398P-201ENST00000384143 109 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 NUDT19P3-201ENST00000404698 555 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MIR1182-201ENST00000408363 97 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC009480.2-201ENST00000422916 432 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 EI24P4-201ENST00000423683 1078 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms