Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC008280.1-201ENST00000418851 412 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 XKRYP6-201ENST00000440468 1116 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 XKRYP3-201ENST00000442113 1116 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 PAICSP4-201ENST00000517543 1253 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC022695.1-201ENST00000522089 237 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 OR4A2P-201ENST00000527276 913 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 MIR486-1-201ENST00000612171 68 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC091953.5-201ENST00000622919 233 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC015908.5-201ENST00000623289 343 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC020978.9-201ENST00000624380 1141 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 HSPA8P17-201ENST00000427029 1382 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 LINC00561-201ENST00000565815 2738 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 SNORA9-201ENST00000384215 133 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 RPL7P60-201ENST00000397636 735 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC244453.4-201ENST00000419150 388 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CCDC75P1-201ENST00000469247 791 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC105918.1-201ENST00000474399 838 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 VWA8P1-201ENST00000510889 176 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 GTF2IP22-201ENST00000554443 182 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC006960.3-201ENST00000561845 705 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC020914.6-201ENST00000594327 272 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AL137072.1-201ENST00000603444 466 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC091905.1-201ENST00000624400 311 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AL049781.1-201ENST00000623195 3585 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 AC087565.3-202ENST00000642085 1603 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 LINC02471-203ENST00000641941 4752 ntBASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.05□□□□□ -1.6
NPC1L1Q9UHC9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 ATP5F1P4-201ENST00000397288 746 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 SYF2P2-201ENST00000417620 583 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 Z85994.2-201ENST00000434327 452 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 HSPE1P22-201ENST00000456856 327 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 RPL7P15-201ENST00000461190 712 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC004069.2-201ENST00000505438 1114 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 RNU6-751P-201ENST00000516382 101 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 SEC11B-201ENST00000518383 499 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AP000619.3-201ENST00000535634 1127 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC022387.2-201ENST00000604050 448 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC007179.3-201ENST00000604976 235 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 RPL31P20-201ENST00000449593 360 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC010342.1-201ENST00000514047 877 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC008489.1-201ENST00000524271 483 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC009268.1-201ENST00000561352 1203 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AL592494.3-201ENST00000609485 464 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC004241.3-201ENST00000611728 517 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 AC012314.7-201ENST00000619693 93 ntBASIC5.04□□□□□ -1.6
NPC1L1Q9UHC9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 NEAT1-202ENST00000501122 22743 ntBASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 RNU1-18P-201ENST00000363062 164 ntBASIC5.03□□□□□ -1.6
NPC1L1Q9UHC9 RNA5SP51-201ENST00000364750 119 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 373.3 ms