| CNTNAP2 | Q9UHC6 | AC007224.1-201 | ENST00000564410 | 144 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010546.1-201 | ENST00000569391 | 485 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP000919.1-202 | ENST00000581139 | 1264 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC083760.1-201 | ENST00000589621 | 670 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ZNF682-204 | ENST00000593468 | 581 nt | TSL 4 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC124856.1-201 | ENST00000600819 | 896 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | Z98200.1-201 | ENST00000607298 | 470 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL357078.3-201 | ENST00000607528 | 618 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC087241.4-201 | ENST00000612441 | 480 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP002782.1-201 | ENST00000623107 | 614 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | FTO-223 | ENST00000640179 | 210 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | NOL8P1-201 | ENST00000508336 | 3529 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | INPP4B-215 | ENST00000509777 | 4334 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ZNF445-201 | ENST00000396077 | 18299 nt | APPRIS P1 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | VPS35P1-201 | ENST00000563400 | 1518 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | KCNH7-205 | ENST00000621889 | 1893 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CUL2-201 | ENST00000374746 | 3903 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ZNF705A-204 | ENST00000610508 | 3378 nt | APPRIS P1 TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LARP4-202 | ENST00000347328 | 3621 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ARL15-202 | ENST00000504924 | 2486 nt | APPRIS P2 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ARL15-207 | ENST00000620747 | 2486 nt | APPRIS ALT1 TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | PARP15-206 | ENST00000493645 | 1311 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | GAS2L3-202 | ENST00000537247 | 2742 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RLIMP2-201 | ENST00000427891 | 1563 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AKAP4-201 | ENST00000358526 | 2881 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ERICH3-AS1-202 | ENST00000612390 | 4874 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | KCNJ6-201 | ENST00000609713 | 19645 nt | APPRIS P1 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | EIF4E3-202 | ENST00000389826 | 6083 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL158163.1-201 | ENST00000603915 | 1649 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ESCO1-201 | ENST00000269214 | 4523 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | TAS2R3-201 | ENST00000247879 | 1101 nt | APPRIS P1 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | C8orf59-201 | ENST00000321777 | 325 nt | TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MIR383-201 | ENST00000362257 | 73 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MIR513B-201 | ENST00000385136 | 84 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | BPIFC-202 | ENST00000397450 | 458 nt | TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AF130351.1-202 | ENST00000400562 | 808 nt | APPRIS P5 TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC097374.1-203 | ENST00000400783 | 485 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC099566.1-204 | ENST00000413825 | 943 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPL22P18-201 | ENST00000417197 | 377 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SEPT2P1-201 | ENST00000419651 | 180 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LINC01318-201 | ENST00000423593 | 597 nt | TSL 4 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010099.3-201 | ENST00000423896 | 409 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | NANOGP5-201 | ENST00000424456 | 877 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | DNAJA1P1-201 | ENST00000425106 | 1187 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL353801.1-201 | ENST00000425541 | 425 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CLEC5A-202 | ENST00000438351 | 743 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL512326.1-201 | ENST00000443050 | 721 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL513412.1-201 | ENST00000445708 | 553 nt | TSL 4 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC018731.1-201 | ENST00000447078 | 576 nt | TSL 4 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC114755.5-201 | ENST00000447760 | 831 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | TMEM246-AS1-204 | ENST00000450109 | 538 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPL7AP52-201 | ENST00000458096 | 790 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPL23AP65-201 | ENST00000475608 | 468 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPL35P6-201 | ENST00000490024 | 372 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC108022.1-201 | ENST00000493466 | 478 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP001960.1-201 | ENST00000506494 | 658 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC117532.1-201 | ENST00000514638 | 323 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTCO1P35-201 | ENST00000515270 | 228 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SNORA31.9-201 | ENST00000516429 | 84 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SNORD116-30-201 | ENST00000516468 | 85 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RNU6-334P-201 | ENST00000517072 | 102 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MIR2116-201 | ENST00000517221 | 80 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP003355.1-201 | ENST00000518956 | 587 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | HDAC2-AS2-209 | ENST00000519270 | 1244 nt | TSL 4 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP000857.2-201 | ENST00000532123 | 419 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | DEFB109F-202 | ENST00000542600 | 509 nt | TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL356804.1-201 | ENST00000553791 | 448 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC073878.2-201 | ENST00000565449 | 385 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC068135.2-201 | ENST00000569293 | 1028 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ALDH3A2-208 | ENST00000571163 | 590 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTATP6P3-201 | ENST00000581686 | 676 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | NBR2-204 | ENST00000587322 | 63 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CEACAM7-204 | ENST00000602225 | 524 nt | TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTATP6P2-201 | ENST00000603319 | 678 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP000403.1-201 | ENST00000603349 | 851 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL354984.3-201 | ENST00000604803 | 325 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL158042.1-201 | ENST00000605338 | 460 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC080013.4-201 | ENST00000607624 | 649 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC068944.2-201 | ENST00000610373 | 403 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL359314.1-201 | ENST00000616913 | 261 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC007546.1-201 | ENST00000619452 | 559 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC013470.2-206 | ENST00000636804 | 771 nt | APPRIS P5 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MECOM-219 | ENST00000628990 | 4835 nt | APPRIS P3 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC123767.1-201 | ENST00000519537 | 1439 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CNTN5-209 | ENST00000528682 | 3800 nt | APPRIS P4 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ECHDC1-222 | ENST00000531967 | 2585 nt | APPRIS ALT2 TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ZNF510-201 | ENST00000223428 | 5154 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MYO9A-209 | ENST00000564571 | 8111 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | UTS2B-201 | ENST00000340524 | 2395 nt | APPRIS P1 TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL592182.3-201 | ENST00000642132 | 3304 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC005261.4-201 | ENST00000600047 | 1385 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | GTPBP8-205 | ENST00000473129 | 1518 nt | TSL 2 BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | C12orf50-203 | ENST00000550553 | 1525 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | HMBOX1-202 | ENST00000355231 | 1694 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | OR51F2-201 | ENST00000322110 | 993 nt | APPRIS ALT2 BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MT-ATP6-201 | ENST00000361899 | 681 nt | APPRIS P1 BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RNU4-28P-201 | ENST00000364739 | 141 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP479-201 | ENST00000364858 | 117 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | OR13C3-201 | ENST00000374781 | 1108 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CARD6-202 | ENST00000381677 | 1094 nt | TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |