Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC006130.2-201ENST00000586202 326 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC099669.2-201ENST00000616549 437 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC009318.3-201ENST00000616916 503 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC000123.2-201ENST00000623124 461 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AP005264.7-201ENST00000625003 745 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC119674.1-212ENST00000641155 993 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AL118496.1-201ENST00000440201 1812 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 MIR92A2-201ENST00000385299 75 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 RN7SKP202-201ENST00000410439 330 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 MTCYBP12-201ENST00000440559 1134 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC239367.2-201ENST00000447309 705 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 RAD23BP3-201ENST00000454157 1152 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 RN7SL132P-201ENST00000478131 296 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC020593.1-201ENST00000507399 299 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC093770.1-201ENST00000511559 571 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 SNORD116-26-201ENST00000516006 96 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 RNU6-347P-201ENST00000516658 105 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AL360157.1-201ENST00000565962 87 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC010680.3-201ENST00000604215 520 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC020658.4-201ENST00000613987 684 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 AC007529.1-201ENST00000418574 2178 ntBASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.72□□□□□ -1.65
CLIP2Q9UDT6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLIP2Q9UDT6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.71□□□□□ -1.65
CLIP2Q9UDT6 AC008725.1-201ENST00000605123 2263 ntBASIC4.71□□□□□ -1.65
CLIP2Q9UDT6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL590623.1-201ENST00000427864 105 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 RPL7P28-201ENST00000437739 740 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC239809.1-201ENST00000450470 217 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 GAPDHP36-201ENST00000480688 918 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC005912.1-201ENST00000495392 255 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 CDH12P2-201ENST00000504393 298 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC007424.1-203ENST00000554613 687 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL133247.2-201ENST00000603236 482 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL592436.1-201ENST00000605135 558 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC095038.2-201ENST00000621464 1070 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AC017002.4-201ENST00000604721 1525 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 AL122126.1-201ENST00000546905 1318 ntBASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLIP2Q9UDT6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC095050.2-201ENST00000510748 1458 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 AC017007.4-201ENST00000503353 1352 ntBASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP2Q9UDT6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms