Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 AC068137.3-201ENST00000639191 341 ntBASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 AC073869.6-201ENST00000640656 341 ntBASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 MAPK10-338ENST00000641647 3362 ntBASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM55Q9BYV6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC021242.1-201ENST00000507315 2035 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RPS3AP23-201ENST00000401762 784 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RNU6-248P-201ENST00000410720 107 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AL133482.1-201ENST00000415988 498 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AIMP1P1-201ENST00000418670 937 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 OR4F13P-201ENST00000428478 931 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 OR2B8P-201ENST00000432841 938 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LYPLA1P1-201ENST00000434514 622 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC091862.1-201ENST00000438016 1100 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RPL36AP39-201ENST00000445859 318 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC005077.1-201ENST00000449226 375 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC004129.2-201ENST00000457229 287 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC093899.1-201ENST00000457984 376 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 KLF3P2-201ENST00000465138 268 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RPS20P21-201ENST00000466859 343 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 HMGB1P36-201ENST00000487709 576 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RNF138P1-201ENST00000502765 546 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 KCTD9P2-201ENST00000512203 1013 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC108064.1-201ENST00000513791 460 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 OR5M7P-201ENST00000526140 972 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 BNIP3P8-201ENST00000597863 560 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC006363.1-201ENST00000603806 463 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC113194.1-201ENST00000606037 500 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AC009318.4-201ENST00000620496 486 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AL136228.1-201ENST00000622221 319 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AP004607.3-201ENST00000530354 3915 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AF287957.1-201ENST00000607368 1595 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 SAGE4P-201ENST00000442271 3381 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 SAMMSON-213ENST00000641336 1521 ntBASIC5.74□□□□□ -1.49
TRIM55Q9BYV6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM55Q9BYV6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms