Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC069209.1-201ENST00000619282 651 ntBASIC5.49□□□□□ -1.53
SCAPERQ9BY12 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC011266.1-201ENST00000624119 3569 ntBASIC5.49□□□□□ -1.53
SCAPERQ9BY12 OSTCP5-201ENST00000425293 453 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 KCTD9P3-201ENST00000434597 1169 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC006480.1-201ENST00000449887 378 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC087650.1-201ENST00000431445 468 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AL353743.1-202ENST00000431724 1695 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC091862.1-201ENST00000438016 1100 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AL831737.1-201ENST00000441288 271 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AL356489.2-201ENST00000566968 3528 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAPERQ9BY12 AC093535.2-201ENST00000624769 2326 ntBASIC5.48□□□□□ -1.53
SCAPERQ9BY12 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 HSPE1P27-201ENST00000430808 296 ntBASIC5.47□□□□□ -1.53
SCAPERQ9BY12 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 AC069285.2-201ENST00000440210 275 ntBASIC5.47□□□□□ -1.53
SCAPERQ9BY12 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 AC020893.1-201ENST00000502452 580 ntBASIC5.47□□□□□ -1.53
SCAPERQ9BY12 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 AC022146.1-201ENST00000595307 847 ntBASIC5.47□□□□□ -1.53
SCAPERQ9BY12 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAPERQ9BY12 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCAPERQ9BY12 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.46□□□□□ -1.53
SCAPERQ9BY12 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.46□□□□□ -1.53
SCAPERQ9BY12 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 U3.19-201ENST00000390893 196 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AC093719.1-202ENST00000392735 373 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AL671855.1-201ENST00000446875 1203 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 RN7SL504P-201ENST00000494496 287 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 OR7A8P-201ENST00000595427 913 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AL008729.2-201ENST00000606393 473 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 AL158196.1-201ENST00000616786 434 ntBASIC5.46□□□□□ -1.54
SCAPERQ9BY12 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCAPERQ9BY12 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 RNA5SP39-201ENST00000411245 120 ntBASIC5.45□□□□□ -1.54
SCAPERQ9BY12 BX323014.1-201ENST00000412876 237 ntBASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 OR1AB1P-201ENST00000585564 761 ntBASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AL606834.2-201ENST00000602954 668 ntBASIC5.45□□□□□ -1.54
SCAPERQ9BY12 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCAPERQ9BY12 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms