Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC079610.2-201ENST00000604818 690 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC133644.2-201ENST00000608142 540 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AP000255.1-201ENST00000610276 676 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC012409.3-201ENST00000611343 981 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC022960.3-201ENST00000619794 441 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC119674.1-212ENST00000641155 993 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL592148.3-201ENST00000608771 2646 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 ERCC6-202ENST00000374127 1782 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 MFSD8-213ENST00000641134 1327 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 RAD17P1-201ENST00000418130 2042 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 FAR2P2-201ENST00000413041 594 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC006994.1-201ENST00000438212 839 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 RPL23AP52-201ENST00000439311 478 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 VN1R25P-201ENST00000443385 738 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC069540.1-201ENST00000446320 988 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 RPL5P32-201ENST00000454085 879 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 MTATP6P14-201ENST00000455189 673 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 VN1R40P-201ENST00000455196 941 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 RPS17P11-201ENST00000474297 293 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 RN7SL271P-201ENST00000487601 295 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC004453.1-201ENST00000487895 408 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 TPT1P3-201ENST00000492841 512 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC010476.1-201ENST00000519111 851 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 EIF1P6-201ENST00000600054 334 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL049844.2-201ENST00000604280 628 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC078880.5-201ENST00000617845 421 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL445363.3-201ENST00000623080 671 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AC024023.1-201ENST00000624530 922 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 AL445984.1-201ENST00000637834 659 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC28BQ9BUN5 MTCO1P11-201ENST00000429111 1528 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RNU1-14P-201ENST00000362759 152 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RNU6-468P-201ENST00000384003 109 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL355615.1-201ENST00000406187 641 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL034374.1-201ENST00000406329 351 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RN7SKP235-201ENST00000410662 305 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RNA5SP498-201ENST00000411342 120 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RPL23AP26-201ENST00000412728 464 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL138785.1-201ENST00000425821 331 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC104837.2-201ENST00000427236 424 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL035458.1-201ENST00000433096 585 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 FTH1P16-201ENST00000435241 552 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms