Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMOQ99835 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMOQ99835 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.1□□□□□ -1.59
SMOQ99835 AC011477.1-204ENST00000623416 1325 ntBASIC5.1□□□□□ -1.59
SMOQ99835 AC092184.1-201ENST00000625042 715 ntBASIC5.1□□□□□ -1.59
SMOQ99835 AL022393.1-201ENST00000625142 1677 ntBASIC5.1□□□□□ -1.59
SMOQ99835 AC090582.1-201ENST00000636321 199 ntBASIC5.1□□□□□ -1.59
SMOQ99835 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.1□□□□□ -1.59
SMOQ99835 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMOQ99835 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.1□□□□□ -1.59
SMOQ99835 SMG1P6-201ENST00000532337 2930 ntBASIC5.1□□□□□ -1.59
SMOQ99835 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 RNVU1-6-201ENST00000364688 164 ntBASIC5.09□□□□□ -1.59
SMOQ99835 OR52E6-202ENST00000379946 954 ntBASIC5.09□□□□□ -1.59
SMOQ99835 Y_RNA.559-201ENST00000384686 107 ntBASIC5.09□□□□□ -1.59
SMOQ99835 RNU6-253P-201ENST00000384730 105 ntBASIC5.09□□□□□ -1.59
SMOQ99835 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SMOQ99835 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 FABP12P1-201ENST00000401911 322 ntBASIC5.09□□□□□ -1.59
SMOQ99835 RNU2-6P-201ENST00000411404 190 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 TPT1P2-201ENST00000413105 503 ntBASIC5.09□□□□□ -1.59
SMOQ99835 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 MTCO1P21-201ENST00000416634 589 ntBASIC5.09□□□□□ -1.59
SMOQ99835 OR6C64P-201ENST00000419708 825 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 NRBF2P3-201ENST00000432731 865 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AC092162.1-201ENST00000432828 434 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL590103.1-201ENST00000434488 307 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 MTND4P6-201ENST00000438297 472 ntBASIC5.09□□□□□ -1.59
SMOQ99835 PPIAP17-201ENST00000438507 471 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 RN7SKP276-201ENST00000516242 268 ntBASIC5.09□□□□□ -1.59
SMOQ99835 Y_RNA.695-201ENST00000516715 107 ntBASIC5.09□□□□□ -1.59
SMOQ99835 Y_RNA.719-201ENST00000517156 106 ntBASIC5.09□□□□□ -1.59
SMOQ99835 RNU6-709P-201ENST00000517257 104 ntBASIC5.09□□□□□ -1.59
SMOQ99835 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 AC133555.2-201ENST00000550213 292 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AC004217.3-201ENST00000551552 878 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AC007954.1-201ENST00000554198 494 ntBASIC5.09□□□□□ -1.59
SMOQ99835 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 AC093249.4-201ENST00000564755 259 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AGGF1P4-201ENST00000568249 801 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.09□□□□□ -1.59
SMOQ99835 RN7SL802P-201ENST00000577858 299 ntBASIC5.09□□□□□ -1.59
SMOQ99835 MIR5699-201ENST00000578903 90 ntBASIC5.09□□□□□ -1.59
SMOQ99835 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.09□□□□□ -1.59
SMOQ99835 AC073544.2-201ENST00000601155 540 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL390838.2-201ENST00000602394 274 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL512782.1-201ENST00000603093 364 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AL390816.3-201ENST00000604527 1066 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AC245297.2-201ENST00000610119 565 ntBASIC5.09□□□□□ -1.59
SMOQ99835 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 AC092656.1-203ENST00000624134 423 ntBASIC5.09□□□□□ -1.59
SMOQ99835 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SMOQ99835 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.09□□□□□ -1.59
SMOQ99835 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMOQ99835 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.6
SMOQ99835 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SMOQ99835 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SMOQ99835 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 RBPJP2-201ENST00000618187 1444 ntBASIC5.08□□□□□ -1.6
SMOQ99835 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 MTND4P34-201ENST00000572715 1371 ntBASIC5.08□□□□□ -1.6
SMOQ99835 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 RNU6-500P-201ENST00000362349 107 ntBASIC5.08□□□□□ -1.6
SMOQ99835 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 RNU6-1300P-201ENST00000391046 108 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AL121978.1-201ENST00000402778 359 ntBASIC5.08□□□□□ -1.6
SMOQ99835 Y_RNA.619-201ENST00000410951 90 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms