Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC002524.1-201ENST00000411687 547 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 NDUFB1P1-201ENST00000435191 180 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 CYCSP35-201ENST00000451978 304 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC009303.3-201ENST00000591103 736 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC012493.2-201ENST00000595083 291 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 RNU6-84P-201ENST00000607737 102 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 MFSD8-233ENST00000641482 4860 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 MTND5P1-201ENST00000445440 1375 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 MIR34B-201ENST00000385076 84 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 IFNNP1-201ENST00000429219 553 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC073063.1-201ENST00000434352 607 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AL589765.3-201ENST00000446084 462 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC084357.1-201ENST00000473404 255 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 AC074140.1-201ENST00000621617 208 ntBASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDK5RAP2Q96SN8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.73
CDK5RAP2Q96SN8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.21□□□□□ -1.73
CDK5RAP2Q96SN8 AC007656.2-201ENST00000624902 4547 ntBASIC4.21□□□□□ -1.73
CDK5RAP2Q96SN8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 AC007685.1-201ENST00000329806 452 ntBASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 CYCSP32-201ENST00000440548 321 ntBASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 RPS6P4-201ENST00000494693 758 ntBASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 MIR5195-201ENST00000583555 115 ntBASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 AL031985.2-201ENST00000600955 480 ntBASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP2Q96SN8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC002075.2-201ENST00000425207 252 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 HIGD1AP12-201ENST00000427832 281 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC074367.1-201ENST00000438685 1125 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC099560.2-201ENST00000457554 255 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC067852.3-201ENST00000589177 561 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AL451049.1-201ENST00000608672 497 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 MTCO1P22-201ENST00000604619 1360 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 CDC27P2-201ENST00000425026 1922 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 RNA5SP39-201ENST00000411245 120 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 RPL6P21-201ENST00000418672 846 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 CCDC75P1-201ENST00000469247 791 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC138409.2-202ENST00000507274 458 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC010591.1-201ENST00000603941 649 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC115621.1-201ENST00000604653 858 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 SNORD39.4-201ENST00000620099 78 ntBASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK5RAP2Q96SN8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP2Q96SN8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms