Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC021146.5-201ENST00000503544 545 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RNU2-58P-201ENST00000516403 183 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RN7SKP289-201ENST00000517244 295 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 IGHV3-76-201ENST00000522465 295 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 OR8G5-201ENST00000524943 1041 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC091516.1-201ENST00000549191 703 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC211433.2-201ENST00000608433 387 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC019131.2-201ENST00000609071 870 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 MIR6729-201ENST00000618194 65 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AL356317.1-201ENST00000396110 1436 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC024560.2-201ENST00000507981 1497 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AP002001.2-201ENST00000529025 1469 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MAPK10-362ENST00000641864 4484 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC079741.1-201ENST00000321498 212 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MIR383-201ENST00000362257 73 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 SNORA48.8-201ENST00000391324 134 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC092642.1-201ENST00000392417 425 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL034403.1-201ENST00000399414 885 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL391417.1-201ENST00000404100 426 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC010740.1-201ENST00000417035 684 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC114814.2-201ENST00000419195 485 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 CNOT7P1-201ENST00000429006 852 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 RPS27AP12-201ENST00000429552 465 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 EIF2S2P2-201ENST00000447161 982 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC087312.1-201ENST00000471411 480 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 RN7SL177P-201ENST00000476596 299 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 LARP7P4-201ENST00000481075 878 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC092185.1-201ENST00000491371 97 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 OR4A12P-201ENST00000530847 918 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AP004242.1-201ENST00000533701 349 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MIR4480-201ENST00000582492 71 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC011477.5-201ENST00000586571 259 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC005191.1-201ENST00000603950 358 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MIR6862-1-201ENST00000613016 70 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC005156.1-201ENST00000613371 573 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 MIR6862-2-201ENST00000614755 70 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AC145207.9-201ENST00000623802 325 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL132640.2-201ENST00000559968 1698 ntBASIC2.84□□□□□ -1.95
AP1S3Q96PC3 AL672296.1-201ENST00000427780 2158 ntBASIC2.84□□□□□ -1.96
AP1S3Q96PC3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
AP1S3Q96PC3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.84□□□□□ -1.96
AP1S3Q96PC3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
AP1S3Q96PC3 AC005183.1-201ENST00000603687 1979 ntBASIC2.83□□□□□ -1.96
AP1S3Q96PC3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
AP1S3Q96PC3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP1S3Q96PC3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP1S3Q96PC3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
AP1S3Q96PC3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
AP1S3Q96PC3 RPL31P45-201ENST00000419532 356 ntBASIC2.83□□□□□ -1.96
AP1S3Q96PC3 AC006455.6-201ENST00000426192 893 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms