Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL589826.1-201ENST00000340697 249 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RNA5SP399-201ENST00000364003 117 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RNU6-98P-201ENST00000384173 107 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 ARL2BPP3-201ENST00000421226 480 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC234779.1-201ENST00000425910 285 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL691449.1-201ENST00000426570 421 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 FAR1P1-201ENST00000427163 934 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL356276.2-201ENST00000435919 558 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RPL7P29-201ENST00000437151 728 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL513321.1-201ENST00000441175 761 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC006326.1-201ENST00000445465 787 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC114755.5-201ENST00000447760 831 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL161747.1-201ENST00000480068 358 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RPS3AP6-201ENST00000484430 795 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC069499.1-201ENST00000489433 509 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC026979.1-201ENST00000492525 396 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RPL30P11-201ENST00000495304 339 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC103833.1-201ENST00000517442 172 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AL731537.2-201ENST00000561565 951 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC233266.2-201ENST00000567067 528 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 PCNAP1-202ENST00000595299 752 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 AC018618.2-201ENST00000604770 446 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.8□□□□□ -1.8
UBE2E3Q969T4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE2E3Q969T4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC234782.4-201ENST00000417646 1048 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AL031736.2-201ENST00000426573 787 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 H2AFZP6-201ENST00000444403 394 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 YWHAQP9-201ENST00000445891 512 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC009220.1-201ENST00000451614 275 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 RPL5P32-201ENST00000454085 879 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 FTH1P24-201ENST00000503502 462 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 NDUFB4P12-201ENST00000513465 390 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 RNA5SP179-201ENST00000517284 121 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 OR4A2P-201ENST00000527276 913 ntBASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.79□□□□□ -1.8
UBE2E3Q969T4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms