Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC008549.2-201ENST00000333482 706 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-500P-201ENST00000362349 107 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 Y_RNA.560-201ENST00000384689 102 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL138880.1-201ENST00000405824 642 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL139128.1-201ENST00000413921 941 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 HSFY4P-201ENST00000415994 1181 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 BOLA3P4-201ENST00000418151 400 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 TIMM9P2-201ENST00000419324 266 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC010153.1-201ENST00000432862 727 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC008072.1-201ENST00000434254 824 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 MTCYBP39-201ENST00000437562 491 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RPL35AP21-201ENST00000437667 333 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC241584.1-201ENST00000438469 1241 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL450023.3-201ENST00000440592 271 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 TCEA1P1-201ENST00000449716 880 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL691482.1-201ENST00000453255 87 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL354710.1-201ENST00000453641 246 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 DDX39BP2-208ENST00000453923 258 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RPS4XP12-201ENST00000461747 709 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RPL7P38-201ENST00000488396 739 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 UBA52P3-201ENST00000491303 382 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 RPS6P4-201ENST00000494693 758 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 DSTNP2-201ENST00000504533 515 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC023161.2-201ENST00000551218 780 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AF131215.7-201ENST00000602443 707 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC023813.4-201ENST00000607580 580 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL136295.6-201ENST00000610486 658 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL133243.1-201ENST00000614487 366 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC116563.2-201ENST00000624751 535 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC127502.3-201ENST00000636170 1206 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL390237.1-201ENST00000404226 1415 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-115P-201ENST00000364310 107 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 SNORA70.10-201ENST00000384515 134 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-253P-201ENST00000384730 105 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC068533.2-201ENST00000411872 306 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 Z99497.1-201ENST00000421282 135 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC233981.1-201ENST00000423224 461 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 MTCO2P16-201ENST00000436962 677 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 RPL34P20-201ENST00000442771 351 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC012512.1-201ENST00000446594 718 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 NF1P3-201ENST00000457709 450 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 RPS3AP41-201ENST00000462701 778 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC083982.1-201ENST00000485679 344 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC073073.1-201ENST00000493920 463 ntBASIC4.87□□□□□ -1.63
PTCHD3Q3KNS1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms