Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC074029.4-201ENST00000624796 1859 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC019155.1-201ENST00000382242 574 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 MIR491-201ENST00000384877 84 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 DNAJC19P1-201ENST00000455312 319 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC010307.1-201ENST00000467206 836 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC006511.1-201ENST00000470614 315 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 RN7SKP13-201ENST00000515933 244 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 SNORA74D-201ENST00000516404 141 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 RNU6-579P-201ENST00000516879 102 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 AL160281.1-201ENST00000605307 311 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 BRDTP1-201ENST00000605735 677 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 MIR7975-201ENST00000619350 68 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 FAM35DP-201ENST00000323387 2712 ntBASIC4.45□□□□□ -1.7
RFX7Q2KHR2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFX7Q2KHR2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC032011.1-201ENST00000611703 1549 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 OR10J6P-201ENST00000289731 930 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 MIR708-201ENST00000390708 88 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RANP7-201ENST00000418085 644 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC013470.3-201ENST00000420252 1194 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 NPM1P39-201ENST00000449818 867 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 NPM1P17-201ENST00000479221 602 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RN7SL293P-201ENST00000481765 281 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC008011.1-201ENST00000545989 227 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC027281.1-201ENST00000574178 758 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RN7SL371P-201ENST00000578099 267 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RMST_9.1-201ENST00000619945 193 ntBASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFX7Q2KHR2 RNU6-283P-201ENST00000364788 107 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 RNU6-729P-201ENST00000384399 107 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 RPL21P23-201ENST00000446654 460 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 PLGLA-201ENST00000465668 449 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 HMGN1P11-201ENST00000508668 303 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AC007458.1-201ENST00000542812 373 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AL159169.3-201ENST00000608871 561 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AL732618.1-201ENST00000623251 301 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AP002967.1-201ENST00000624203 539 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AL356489.2-201ENST00000566968 3528 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AC007823.1-201ENST00000569932 1566 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 AC083899.2-201ENST00000423285 1376 ntBASIC4.43□□□□□ -1.7
RFX7Q2KHR2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RFX7Q2KHR2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 SNORD9-201ENST00000362566 104 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 SKP1P1-201ENST00000438081 489 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC104978.1-201ENST00000449387 391 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 PPIAP3-201ENST00000450588 505 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 MTCO3P20-201ENST00000454926 688 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX7Q2KHR2 SNORA70.24-201ENST00000517233 118 ntBASIC4.42□□□□□ -1.7
RFX7Q2KHR2 AC107918.3-201ENST00000533272 382 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms