Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL627230.1-201ENST00000613077 211 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 AL121873.1-201ENST00000616013 524 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AL022401.1-201ENST00000619498 108 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC010872.1-201ENST00000624225 675 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC138649.5-201ENST00000637456 137 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SCN1BQ07699 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 C4BPAP1-201ENST00000415474 1893 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC097504.1-201ENST00000515103 2415 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCN1BQ07699 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 OR4A15-201ENST00000314706 1035 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 SNORA51.1-201ENST00000363243 140 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 RNU6-236P-201ENST00000363886 106 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCN1BQ07699 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 RNU4-34P-201ENST00000410431 124 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 ELOCP18-201ENST00000434209 337 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.09□□□□□ -1.75
SCN1BQ07699 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC234781.3-201ENST00000452540 973 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 NPM1P13-201ENST00000452663 865 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC133473.1-201ENST00000455173 299 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 RPL5P23-201ENST00000496040 868 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 PARP4P3-201ENST00000510265 317 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC019227.1-201ENST00000526902 510 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 NDUFS5P6-201ENST00000529136 295 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC092747.2-201ENST00000545069 983 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AGGF1P6-201ENST00000569213 976 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC005412.1-201ENST00000580812 1049 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 MIR3176-201ENST00000582210 90 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC006116.3-201ENST00000592968 361 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC025588.3-201ENST00000604182 274 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC093673.2-201ENST00000609674 331 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC004825.2-201ENST00000616634 455 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 U73479.1-201ENST00000618062 168 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC068722.2-201ENST00000618734 544 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AC004943.3-201ENST00000624116 600 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AC090506.2-201ENST00000624521 419 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 AL353662.3-201ENST00000625131 237 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL355578.1-201ENST00000607405 1328 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL590763.1-201ENST00000398297 1545 ntBASIC4.09□□□□□ -1.75
SCN1BQ07699 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN1BQ07699 AL391684.1-202ENST00000641293 1636 ntBASIC4.09□□□□□ -1.76
SCN1BQ07699 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.09□□□□□ -1.76
SCN1BQ07699 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCN1BQ07699 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN1BQ07699 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SCN1BQ07699 AC026951.1-201ENST00000559530 2459 ntBASIC4.09□□□□□ -1.76
SCN1BQ07699 AC105074.1-201ENST00000623380 3095 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN1BQ07699 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN1BQ07699 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN1BQ07699 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCN1BQ07699 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 RNU1-15P-201ENST00000353977 144 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 RNA5SP513-201ENST00000364648 118 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCN1BQ07699 IQCB2P-201ENST00000401788 1633 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AP002530.1-201ENST00000405705 684 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 FCF1P2-201ENST00000415284 583 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 MTCYBP24-201ENST00000420387 1106 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 SEPT7P7-201ENST00000420492 1301 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms