Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
RAE1P78406 RFPL1S-203ENST00000539579 330 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.63□□□□□ -1.67
RAE1P78406 HAUS8P1-201ENST00000549005 542 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 TRAV15-201ENST00000556680 249 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC011260.1-201ENST00000578420 472 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MIR3936-201ENST00000584304 110 ntBASIC4.63□□□□□ -1.67
RAE1P78406 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 AC017100.2-201ENST00000584628 355 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.63□□□□□ -1.67
RAE1P78406 WISP1-OT1-201ENST00000602893 642 ntBASIC4.63□□□□□ -1.67
RAE1P78406 PSMA6P4-201ENST00000603247 718 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC091946.2-201ENST00000606105 291 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 AL158063.1-201ENST00000615349 536 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MIR8069-1-201ENST00000616627 86 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AL121890.2-201ENST00000617644 465 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MIR6826-201ENST00000617808 98 ntBASIC4.63□□□□□ -1.67
RAE1P78406 MIR8069-2-201ENST00000621412 86 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC008443.7-201ENST00000622195 246 ntBASIC4.63□□□□□ -1.67
RAE1P78406 AC015871.5-202ENST00000623252 701 ntBASIC4.63□□□□□ -1.67
RAE1P78406 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RAE1P78406 AL353662.3-201ENST00000625131 237 ntBASIC4.63□□□□□ -1.67
RAE1P78406 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 PCMTD1P7-201ENST00000634506 357 ntBASIC4.63□□□□□ -1.67
RAE1P78406 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 AL731566.1-201ENST00000620490 1937 ntBASIC4.63□□□□□ -1.67
RAE1P78406 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.63□□□□□ -1.67
RAE1P78406 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAE1P78406 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 SMG1P6-201ENST00000532337 2930 ntBASIC4.62□□□□□ -1.67
RAE1P78406 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
RAE1P78406 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RAE1P78406 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RAE1P78406 Y_RNA.18-201ENST00000362461 102 ntBASIC4.62□□□□□ -1.67
RAE1P78406 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 Z97832.1-201ENST00000402490 328 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL355379.1-201ENST00000405542 640 ntBASIC4.62□□□□□ -1.67
RAE1P78406 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.62□□□□□ -1.67
RAE1P78406 PIGPP2-201ENST00000411569 458 ntBASIC4.62□□□□□ -1.67
RAE1P78406 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 NPM1P11-201ENST00000417106 855 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL121878.1-201ENST00000418638 859 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC009237.2-201ENST00000421358 284 ntBASIC4.62□□□□□ -1.67
RAE1P78406 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 MTCO3P1-205ENST00000422088 832 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL645608.4-201ENST00000423619 154 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC012519.1-201ENST00000424588 610 ntBASIC4.62□□□□□ -1.67
RAE1P78406 NPM1P24-201ENST00000428039 894 ntBASIC4.62□□□□□ -1.67
RAE1P78406 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.62□□□□□ -1.67
RAE1P78406 AC241584.1-201ENST00000438469 1241 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.62□□□□□ -1.67
RAE1P78406 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 TAF9P1-201ENST00000445421 515 ntBASIC4.62□□□□□ -1.67
RAE1P78406 NDUFA5P7-201ENST00000452914 242 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 MTCO3P16-201ENST00000454456 754 ntBASIC4.62□□□□□ -1.67
RAE1P78406 TAF9P2-201ENST00000454958 515 ntBASIC4.62□□□□□ -1.67
RAE1P78406 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 AC109462.1-201ENST00000491087 368 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 ARL4AP1-201ENST00000503220 705 ntBASIC4.62□□□□□ -1.67
RAE1P78406 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 MTCO3P7-201ENST00000510008 774 ntBASIC4.62□□□□□ -1.67
RAE1P78406 RN7SKP66-201ENST00000516681 231 ntBASIC4.62□□□□□ -1.67
RAE1P78406 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.62□□□□□ -1.67
RAE1P78406 SLC2A13P1-201ENST00000531560 322 ntBASIC4.62□□□□□ -1.67
RAE1P78406 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.62□□□□□ -1.67
RAE1P78406 AC093249.4-201ENST00000564755 259 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.62□□□□□ -1.67
RAE1P78406 SNORA74C-1-201ENST00000580726 201 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC103987.3-201ENST00000582071 292 ntBASIC4.62□□□□□ -1.67
RAE1P78406 VN1R92P-201ENST00000598511 928 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC025165.5-201ENST00000602802 578 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL122125.1-201ENST00000616999 600 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 AC127502.3-201ENST00000636170 1206 ntBASIC4.62□□□□□ -1.67
RAE1P78406 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.62□□□□□ -1.67
RAE1P78406 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms