Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL365503.1-201ENST00000605247 905 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 AP003400.2-201ENST00000624036 666 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC091905.1-201ENST00000624400 311 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC008013.2-202ENST00000637965 364 ntBASIC3.34□□□□□ -1.87
UBA52P62987 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBA52P62987 OR6C71P-202ENST00000641886 1107 ntBASIC3.34□□□□□ -1.87
UBA52P62987 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
UBA52P62987 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBA52P62987 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBA52P62987 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UBA52P62987 ERCC6-202ENST00000374127 1782 ntBASIC3.33□□□□□ -1.88
UBA52P62987 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 MIR449B-201ENST00000384995 97 ntBASIC3.33□□□□□ -1.88
UBA52P62987 AC007068.1-201ENST00000396690 844 ntBASIC3.33□□□□□ -1.88
UBA52P62987 HLFP1-201ENST00000402375 499 ntBASIC3.33□□□□□ -1.88
UBA52P62987 RNU4-6P-201ENST00000410804 122 ntBASIC3.33□□□□□ -1.88
UBA52P62987 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.33□□□□□ -1.88
UBA52P62987 RPL37P1-201ENST00000432310 284 ntBASIC3.33□□□□□ -1.88
UBA52P62987 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
UBA52P62987 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 MTND4LP12-201ENST00000448237 295 ntBASIC3.33□□□□□ -1.88
UBA52P62987 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 OR52Y1P-201ENST00000452418 828 ntBASIC3.33□□□□□ -1.88
UBA52P62987 ANP32BP2-201ENST00000454525 545 ntBASIC3.33□□□□□ -1.88
UBA52P62987 RPL38P1-201ENST00000460914 211 ntBASIC3.33□□□□□ -1.88
UBA52P62987 AC010468.1-201ENST00000461022 817 ntBASIC3.33□□□□□ -1.88
UBA52P62987 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 RN7SL271P-201ENST00000487601 295 ntBASIC3.33□□□□□ -1.88
UBA52P62987 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.33□□□□□ -1.88
UBA52P62987 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.33□□□□□ -1.88
UBA52P62987 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 AC005255.1-201ENST00000593748 216 ntBASIC3.33□□□□□ -1.88
UBA52P62987 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.33□□□□□ -1.88
UBA52P62987 BRDTP1-201ENST00000605735 677 ntBASIC3.33□□□□□ -1.88
UBA52P62987 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
UBA52P62987 OR5AC4P-202ENST00000642086 985 ntBASIC3.33□□□□□ -1.88
UBA52P62987 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBA52P62987 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.33□□□□□ -1.88
UBA52P62987 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
UBA52P62987 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.33□□□□□ -1.88
UBA52P62987 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.32□□□□□ -1.88
UBA52P62987 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 FAM91A3P-201ENST00000456826 2544 ntBASIC3.32□□□□□ -1.88
UBA52P62987 MIR208A-201ENST00000362287 71 ntBASIC3.32□□□□□ -1.88
UBA52P62987 RNA5SP387-201ENST00000364226 106 ntBASIC3.32□□□□□ -1.88
UBA52P62987 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
UBA52P62987 MIR1251-201ENST00000408552 70 ntBASIC3.32□□□□□ -1.88
UBA52P62987 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.32□□□□□ -1.88
UBA52P62987 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
UBA52P62987 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AC106901.1-201ENST00000425086 698 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.32□□□□□ -1.88
UBA52P62987 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.32□□□□□ -1.88
UBA52P62987 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.32□□□□□ -1.88
UBA52P62987 FCF1P7-201ENST00000451185 558 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AP000926.1-201ENST00000479573 241 ntBASIC3.32□□□□□ -1.88
UBA52P62987 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 snoU109.6-201ENST00000516831 118 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.32□□□□□ -1.88
UBA52P62987 AL139174.1-201ENST00000531489 886 ntBASIC3.32□□□□□ -1.88
UBA52P62987 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.32□□□□□ -1.88
UBA52P62987 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
UBA52P62987 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
UBA52P62987 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.32□□□□□ -1.88
UBA52P62987 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.32□□□□□ -1.88
UBA52P62987 AC244100.1-202ENST00000621554 382 ntBASIC3.32□□□□□ -1.88
UBA52P62987 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBA52P62987 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
UBA52P62987 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
UBA52P62987 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 RNU6-761P-201ENST00000384148 107 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC093719.1-202ENST00000392735 373 ntBASIC3.31□□□□□ -1.88
UBA52P62987 MTCO3P31-201ENST00000405526 789 ntBASIC3.31□□□□□ -1.88
UBA52P62987 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 CRYBB2P1-203ENST00000415709 538 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC010740.1-201ENST00000417035 684 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AL691449.1-201ENST00000426570 421 ntBASIC3.31□□□□□ -1.88
UBA52P62987 FTH1P6-201ENST00000430768 320 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms