Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR659-201ENST00000384963 97 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 SNORA11F-201ENST00000408237 128 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.8□□□□□ -1.96
CKS1BP61024 RPL7AP25-201ENST00000423357 805 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AC002075.2-201ENST00000425207 252 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AC008065.1-201ENST00000428525 348 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 VN1R25P-201ENST00000443385 738 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 RPS3AP53-201ENST00000454716 778 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 VN1R40P-201ENST00000455196 941 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 RPL36AP13-201ENST00000457490 317 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AC010326.1-201ENST00000462726 602 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 RPL12P20-201ENST00000475538 479 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 F11-205ENST00000492972 1204 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 ATG10-208ENST00000513634 618 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC009643.1-201ENST00000532030 391 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.8□□□□□ -1.96
CKS1BP61024 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 GNRHR2P1-201ENST00000555315 631 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AL133457.1-201ENST00000564251 987 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 MIR4270-201ENST00000581799 70 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 EIF1P6-201ENST00000600054 334 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.8□□□□□ -1.96
CKS1BP61024 AC113403.1-201ENST00000604910 193 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AL161912.3-201ENST00000605404 628 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 AL445222.1-201ENST00000607259 628 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 SDR42E1P1-201ENST00000611327 477 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 AC002044.3-201ENST00000623314 541 ntBASIC2.8□□□□□ -1.96
CKS1BP61024 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS1BP61024 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.8□□□□□ -1.96
CKS1BP61024 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 AC116096.1-201ENST00000566804 2314 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS1BP61024 MIR331-201ENST00000362302 94 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 SNORA51.2-201ENST00000364595 132 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CKS1BP61024 AL049697.2-201ENST00000403708 294 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 MIR1251-201ENST00000408552 70 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 PGBD4P8-201ENST00000412993 562 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 NDUFB4P5-201ENST00000415445 361 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AL590139.1-201ENST00000416267 400 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 PHBP16-201ENST00000446318 950 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS1BP61024 AC016724.1-201ENST00000453215 421 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 DHFRP3-201ENST00000455595 559 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 RPL21P104-201ENST00000464143 478 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AL161747.1-201ENST00000480068 358 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 RPL29P14-201ENST00000495837 428 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS1BP61024 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
CKS1BP61024 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 RNA5SP385-201ENST00000515947 110 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 RN7SKP244-201ENST00000516513 307 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 RN7SKP289-201ENST00000517244 295 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 IGLVIV-65-201ENST00000517313 360 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS1BP61024 CYP2C60P-201ENST00000566088 139 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 MAGOH2P-202ENST00000584384 429 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.79□□□□□ -1.96
CKS1BP61024 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS1BP61024 AP003117.1-201ENST00000602771 554 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 AC006023.2-201ENST00000609916 167 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 AC064801.1-201ENST00000612025 407 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 AC090510.2-201ENST00000617465 629 ntBASIC2.79□□□□□ -1.96
CKS1BP61024 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS1BP61024 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS1BP61024 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms