Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN8P56748 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN8P56748 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 AC068287.1-201ENST00000430283 295 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN8P56748 HMGB1P5-202ENST00000451497 985 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 AC146507.1-201ENST00000468335 354 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 UQCRHP4-201ENST00000471686 272 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 TMED11P-201ENST00000479478 690 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN8P56748 RN7SL205P-201ENST00000490174 284 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN8P56748 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN8P56748 AC093840.1-201ENST00000511599 336 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN8P56748 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN8P56748 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN8P56748 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN8P56748 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN8P56748 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN8P56748 ADAM3B-201ENST00000569937 840 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN8P56748 AC121761.2-201ENST00000617300 689 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 RN7SL722P-201ENST00000617780 284 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 RN7SL565P-201ENST00000618246 284 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 AC010608.2-201ENST00000624830 470 ntBASIC3.79□□□□□ -1.8
CLDN8P56748 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN8P56748 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLDN8P56748 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN8P56748 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CLDN8P56748 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN8P56748 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN8P56748 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN8P56748 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
CLDN8P56748 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 RNA5SP391-201ENST00000363456 119 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 RNU11-4P-201ENST00000391149 133 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RN7SKP33-201ENST00000410942 340 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 TPT1P2-201ENST00000413105 503 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RPL23AP38-201ENST00000423801 469 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC115285.1-201ENST00000424879 736 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 OR5BE1P-201ENST00000425977 939 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN8P56748 HIGD1AP4-201ENST00000430194 280 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 CYCSP42-201ENST00000450823 238 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RPS29P33-201ENST00000456717 146 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RPL37P6-202ENST00000464216 403 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 AC078817.1-201ENST00000492623 435 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC090071.1-201ENST00000507713 644 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 MTCO1P30-201ENST00000515244 580 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 AP004242.1-201ENST00000533701 349 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 AC091516.1-201ENST00000549191 703 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 IPO5P1-202ENST00000600039 287 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC007687.1-201ENST00000602704 304 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AC073111.2-201ENST00000605657 1075 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN8P56748 MIR6868-201ENST00000611215 58 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 MIR6730-201ENST00000622213 67 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 OR5BE1P-202ENST00000641168 1176 ntBASIC3.78□□□□□ -1.8
CLDN8P56748 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN8P56748 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN8P56748 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN8P56748 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN8P56748 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN8P56748 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN8P56748 RNA5SP399-201ENST00000364003 117 ntBASIC3.77□□□□□ -1.81
CLDN8P56748 SNORD6-201ENST00000365444 73 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms