Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC009159.1-201ENST00000618386 642 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AC139792.3-201ENST00000623525 224 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GFRA1P56159 MTND4P29-201ENST00000503122 1372 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC092125.1-201ENST00000562568 1995 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC133552.1-201ENST00000569988 4007 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC097714.1-201ENST00000511272 1647 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 SAMMSON-210ENST00000641260 1308 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC008033.1-201ENST00000216407 1162 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 FRG1BP-201ENST00000278882 761 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 RNA5SP394-201ENST00000364216 119 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 RNA5SP284-201ENST00000384547 118 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 RPL23AP32-201ENST00000395315 459 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 OR2W4P-201ENST00000406496 926 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 NME1P1-201ENST00000420914 382 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 RPL7P57-201ENST00000423238 740 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.31□□□□□ -1.56
GFRA1P56159 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 AL663074.2-201ENST00000440621 479 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 AL136380.1-201ENST00000447970 162 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 TCEA1P1-201ENST00000449716 880 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC104073.1-201ENST00000451988 151 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 ELOCP23-201ENST00000452014 332 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AL445665.1-202ENST00000452436 324 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 snoU13.7-201ENST00000459220 104 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 PLGLA-201ENST00000465668 449 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 PFN1P6-201ENST00000476786 399 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC011005.3-201ENST00000491624 395 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC023194.1-201ENST00000493084 308 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC079382.1-201ENST00000493346 557 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC093767.1-201ENST00000504523 156 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC025465.4-201ENST00000513422 638 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 HMGN2P36-201ENST00000529541 409 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC079600.1-201ENST00000550326 297 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 FGF7P1-201ENST00000582820 288 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC110743.1-201ENST00000584870 478 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.31□□□□□ -1.56
GFRA1P56159 AC060780.3-201ENST00000589464 80 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC008521.2-201ENST00000591021 259 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC055876.5-201ENST00000605667 259 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 BX664608.1-201ENST00000610519 487 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AP005431.1-201ENST00000618479 319 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 AC004009.2-201ENST00000623016 728 ntBASIC5.31□□□□□ -1.56
GFRA1P56159 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.31□□□□□ -1.56
GFRA1P56159 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GFRA1P56159 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GFRA1P56159 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 AC138915.3-201ENST00000562908 1389 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GFRA1P56159 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms