Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC004775.1-201ENST00000607389 753 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL096803.3-201ENST00000609032 532 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC116651.1-201ENST00000609724 556 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL139089.1-201ENST00000620372 975 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC073342.3-201ENST00000624211 193 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC011944.2-201ENST00000624440 683 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC015726.3-201ENST00000624501 418 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC116563.2-201ENST00000624751 535 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PKNOX1P55347 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC00561-201ENST00000565815 2738 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC007685.1-201ENST00000329806 452 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AL589826.1-201ENST00000340697 249 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.85□□□□□ -1.79
PKNOX1P55347 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PKNOX1P55347 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 RPL7P53-201ENST00000421245 739 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AL592293.2-201ENST00000422292 996 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.85□□□□□ -1.79
PKNOX1P55347 CBX1P4-201ENST00000439415 457 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.85□□□□□ -1.79
PKNOX1P55347 MTCO3P43-201ENST00000440974 771 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 BTBD7P2-201ENST00000441962 620 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 RPL34P26-201ENST00000445636 354 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 RPL5P32-201ENST00000454085 879 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC004923.2-201ENST00000529649 369 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.85□□□□□ -1.79
PKNOX1P55347 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC091515.1-201ENST00000548110 679 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC009101.1-201ENST00000568135 242 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC099489.2-201ENST00000574976 260 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 MIR4277-201ENST00000578298 84 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.85□□□□□ -1.79
PKNOX1P55347 EIF1P6-201ENST00000600054 334 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 SUMO2P14-201ENST00000604488 293 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC110792.4-201ENST00000609843 298 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AL118556.2-201ENST00000614375 824 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AL354696.1-201ENST00000614652 497 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AC000123.2-201ENST00000623124 461 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 AP003072.4-201ENST00000624580 310 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC005261.4-201ENST00000600047 1385 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PKNOX1P55347 AC006042.3-201ENST00000454684 1469 ntBASIC3.85□□□□□ -1.79
PKNOX1P55347 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PKNOX1P55347 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PKNOX1P55347 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PKNOX1P55347 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PKNOX1P55347 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 RNU4-31P-201ENST00000384211 141 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 ENSAP1-201ENST00000392855 326 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 ATP5F1P4-201ENST00000397288 746 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 RN7SKP177-201ENST00000410567 355 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC016397.1-201ENST00000412463 242 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AMD1P2-201ENST00000412936 992 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 ARL2BPP3-201ENST00000421226 480 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 COX6CP15-201ENST00000426313 211 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 MED6P1-201ENST00000439659 713 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AL500527.1-201ENST00000448532 255 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 CABYRP1-201ENST00000465493 1045 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 RN7SL738P-201ENST00000470264 297 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC093663.2-201ENST00000484625 313 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC004069.2-201ENST00000505438 1114 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 FTH1P9-201ENST00000513251 355 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 IGKV2D-23-201ENST00000518179 286 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AP003730.1-201ENST00000524605 285 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms