Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PCNPP1-201ENST00000552501 511 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 MIR4509-3-201ENST00000578671 94 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 MIR4509-2-201ENST00000583920 94 ntBASIC4.32□□□□□ -1.72
CDH13P55290 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 AC090330.1-201ENST00000588646 764 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 AC005191.1-201ENST00000603950 358 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC010857.1-201ENST00000606398 594 ntBASIC4.32□□□□□ -1.72
CDH13P55290 MIR4509-1-201ENST00000618224 94 ntBASIC4.32□□□□□ -1.72
CDH13P55290 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH13P55290 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 AC010300.1-201ENST00000600671 5134 ntBASIC4.32□□□□□ -1.72
CDH13P55290 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 KPNA2P2-201ENST00000419546 1489 ntBASIC4.31□□□□□ -1.72
CDH13P55290 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CDH13P55290 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 RNA5SP391-201ENST00000363456 119 ntBASIC4.31□□□□□ -1.72
CDH13P55290 SNORA72.3-201ENST00000365074 132 ntBASIC4.31□□□□□ -1.72
CDH13P55290 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.31□□□□□ -1.72
CDH13P55290 SDHCP2-201ENST00000398565 501 ntBASIC4.31□□□□□ -1.72
CDH13P55290 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
CDH13P55290 RNU6-584P-201ENST00000410350 95 ntBASIC4.31□□□□□ -1.72
CDH13P55290 UBTFL3-201ENST00000418934 1024 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 OSTCP5-201ENST00000425293 453 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 GTF2IP3-201ENST00000433887 494 ntBASIC4.31□□□□□ -1.72
CDH13P55290 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 AC004854.1-201ENST00000440356 349 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AL031313.1-201ENST00000448435 256 ntBASIC4.31□□□□□ -1.72
CDH13P55290 VN1R32P-201ENST00000452234 905 ntBASIC4.31□□□□□ -1.72
CDH13P55290 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.31□□□□□ -1.72
CDH13P55290 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH13P55290 AC079804.1-201ENST00000461922 436 ntBASIC4.31□□□□□ -1.72
CDH13P55290 RPL5P30-201ENST00000465511 891 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 UBTFL6-201ENST00000477929 1024 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC011037.1-201ENST00000483964 558 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
CDH13P55290 NDUFA5P12-201ENST00000503796 343 ntBASIC4.31□□□□□ -1.72
CDH13P55290 PPBPP1-201ENST00000510807 373 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH13P55290 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 OR5AN2P-201ENST00000534535 896 ntBASIC4.31□□□□□ -1.72
CDH13P55290 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 AC051619.2-201ENST00000559063 397 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH13P55290 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
CDH13P55290 HNRNPCP4-201ENST00000571636 900 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH13P55290 AC105227.2-201ENST00000615075 605 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC009704.2-201ENST00000618739 483 ntBASIC4.31□□□□□ -1.72
CDH13P55290 MIR6891-201ENST00000618788 93 ntBASIC4.31□□□□□ -1.72
CDH13P55290 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
CDH13P55290 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH13P55290 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH13P55290 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH13P55290 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CDH13P55290 OR10J6P-201ENST00000289731 930 ntBASIC4.3□□□□□ -1.72
CDH13P55290 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH13P55290 RNU4-51P-201ENST00000364206 140 ntBASIC4.3□□□□□ -1.72
CDH13P55290 RNA5SP397-201ENST00000391323 118 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AL049697.2-201ENST00000403708 294 ntBASIC4.3□□□□□ -1.72
CDH13P55290 SFR1P1-201ENST00000403720 688 ntBASIC4.3□□□□□ -1.72
CDH13P55290 MIR1911-201ENST00000410783 80 ntBASIC4.3□□□□□ -1.72
CDH13P55290 SNORA74C-2-201ENST00000411179 201 ntBASIC4.3□□□□□ -1.72
CDH13P55290 RNU6-575P-201ENST00000411326 105 ntBASIC4.3□□□□□ -1.72
CDH13P55290 MTCO2P8-201ENST00000412213 658 ntBASIC4.3□□□□□ -1.72
CDH13P55290 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH13P55290 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 AL590762.4-201ENST00000425885 253 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 AL645638.1-201ENST00000440519 361 ntBASIC4.3□□□□□ -1.72
CDH13P55290 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH13P55290 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH13P55290 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms