Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC110792.3-201ENST00000595906 1614 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGCS2P54868 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 AC073346.2-201ENST00000624724 2058 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HMGCS2P54868 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGCS2P54868 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
HMGCS2P54868 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGCS2P54868 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 MIR218-2-201ENST00000385006 110 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 ATP5A1P2-201ENST00000412323 255 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 RPL23AP4-201ENST00000427757 463 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 MTND2P2-201ENST00000434633 945 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC099063.2-201ENST00000446360 662 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 RPS3AP46-201ENST00000448352 682 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC069277.2-201ENST00000454211 432 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS2P54868 AC037198.2-201ENST00000478845 733 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC005726.1-201ENST00000494679 427 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC017037.1-201ENST00000508460 471 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 RNU6-760P-201ENST00000516078 97 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCS2P54868 GNRHR2P1-201ENST00000555315 631 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 MIR3908-201ENST00000579798 126 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HMGCS2P54868 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS2P54868 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS2P54868 AL354760.1-201ENST00000608357 643 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC019131.2-201ENST00000609071 870 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AL356274.1-201ENST00000617064 410 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AL162233.1-201ENST00000620014 944 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 AC007342.8-201ENST00000623278 678 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCS2P54868 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCS2P54868 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.71
HMGCS2P54868 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCS2P54868 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS2P54868 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS2P54868 AC005332.5-201ENST00000591222 2919 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGCS2P54868 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
HMGCS2P54868 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS2P54868 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCS2P54868 RNU6-883P-201ENST00000384597 107 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AL589655.1-201ENST00000405398 482 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AC009237.5-201ENST00000414271 501 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS2P54868 MTCO1P45-201ENST00000431457 267 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 AL450263.2-201ENST00000439400 589 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 RPS17P13-201ENST00000448974 407 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 CYCSP35-201ENST00000451978 304 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AL049829.1-201ENST00000465411 156 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS2P54868 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS2P54868 OR4A2P-201ENST00000527276 913 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 BNIP3P19-201ENST00000605397 577 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AP000255.1-201ENST00000610276 676 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AC091948.2-201ENST00000636510 279 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS2P54868 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCS2P54868 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCS2P54868 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HMGCS2P54868 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS2P54868 MTND5P1-201ENST00000445440 1375 ntBASIC4.39□□□□□ -1.71
HMGCS2P54868 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS2P54868 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCS2P54868 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCS2P54868 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCS2P54868 PRO1804-201ENST00000623780 2050 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCS2P54868 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCS2P54868 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AC091390.3-201ENST00000426478 338 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AC069285.2-201ENST00000440210 275 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 Z99127.2-201ENST00000441426 334 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 CASP3P1-201ENST00000446037 609 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms