Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL591473.1-201ENST00000464297 313 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RN7SL443P-201ENST00000464331 290 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RN7SL346P-201ENST00000491561 294 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RN7SL244P-201ENST00000493405 297 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 NDUFB4P12-201ENST00000513465 390 ntBASIC5.13□□□□□ -1.59
NEK3P51956 SNORA3.4-201ENST00000515969 96 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 AL354943.1-201ENST00000572103 781 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 AC233702.9-201ENST00000581528 203 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 AC119501.1-201ENST00000603646 475 ntBASIC5.13□□□□□ -1.59
NEK3P51956 IMMP1LP1-201ENST00000605170 488 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC080013.3-201ENST00000606839 578 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AP005432.2-201ENST00000608162 586 ntBASIC5.13□□□□□ -1.59
NEK3P51956 Mico1.1-201ENST00000611698 204 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AC069209.1-201ENST00000619282 651 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NEK3P51956 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.12□□□□□ -1.59
NEK3P51956 LINC00561-201ENST00000565815 2738 ntBASIC5.12□□□□□ -1.59
NEK3P51956 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
NEK3P51956 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEK3P51956 RNU6-984P-201ENST00000363236 109 ntBASIC5.12□□□□□ -1.59
NEK3P51956 SNORD113-6-201ENST00000363345 75 ntBASIC5.12□□□□□ -1.59
NEK3P51956 SNORA70E-201ENST00000384492 135 ntBASIC5.12□□□□□ -1.59
NEK3P51956 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEK3P51956 Z97832.1-201ENST00000402490 328 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC006960.1-201ENST00000419980 153 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC062016.2-201ENST00000420950 676 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.12□□□□□ -1.59
NEK3P51956 AL772161.1-201ENST00000439130 476 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
NEK3P51956 NECAP1P2-201ENST00000455668 727 ntBASIC5.12□□□□□ -1.59
NEK3P51956 MTND1P16-201ENST00000465177 898 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC004263.1-201ENST00000479327 332 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC091951.3-201ENST00000504093 246 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.12□□□□□ -1.59
NEK3P51956 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 OR5BC1P-201ENST00000529327 739 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 PCNPP1-201ENST00000552501 511 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.12□□□□□ -1.59
NEK3P51956 NMNAT1P1-201ENST00000554095 876 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 HMGB3P26-201ENST00000560051 582 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.12□□□□□ -1.59
NEK3P51956 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.12□□□□□ -1.59
NEK3P51956 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.12□□□□□ -1.59
NEK3P51956 AC011487.3-201ENST00000593607 453 ntBASIC5.12□□□□□ -1.59
NEK3P51956 VN1R82P-201ENST00000601481 356 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC004987.4-201ENST00000603383 338 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC069304.2-201ENST00000605154 435 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AL592221.1-201ENST00000605266 382 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.12□□□□□ -1.59
NEK3P51956 AP003392.5-201ENST00000607857 415 ntBASIC5.12□□□□□ -1.59
NEK3P51956 AC231759.1-201ENST00000616455 597 ntBASIC5.12□□□□□ -1.59
NEK3P51956 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 AC112694.2-201ENST00000623697 768 ntBASIC5.12□□□□□ -1.59
NEK3P51956 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEK3P51956 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms