Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP11P51784 AC068870.1-201ENST00000563737 2455 ntBASIC6.31□□□□□ -1.4
USP11P51784 SPATA2P1-201ENST00000431223 2055 ntBASIC6.31□□□□□ -1.4
USP11P51784 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP11P51784 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 RNU6-723P-201ENST00000383973 107 ntBASIC6.31□□□□□ -1.4
USP11P51784 RNU6-452P-201ENST00000384406 107 ntBASIC6.31□□□□□ -1.4
USP11P51784 RNU6-1300P-201ENST00000391046 108 ntBASIC6.31□□□□□ -1.4
USP11P51784 NACAP7-201ENST00000407371 609 ntBASIC6.31□□□□□ -1.4
USP11P51784 SNORA11B-201ENST00000408175 129 ntBASIC6.31□□□□□ -1.4
USP11P51784 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP11P51784 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 AL390119.1-201ENST00000440329 312 ntBASIC6.31□□□□□ -1.4
USP11P51784 PGBD4P3-201ENST00000440731 581 ntBASIC6.31□□□□□ -1.4
USP11P51784 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 USP9YP12-201ENST00000450481 570 ntBASIC6.31□□□□□ -1.4
USP11P51784 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 AC112206.1-201ENST00000468416 477 ntBASIC6.31□□□□□ -1.4
USP11P51784 RN7SL214P-201ENST00000487317 265 ntBASIC6.31□□□□□ -1.4
USP11P51784 RPL15P21-201ENST00000495592 567 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.31□□□□□ -1.4
USP11P51784 AC114981.1-201ENST00000503897 678 ntBASIC6.31□□□□□ -1.4
USP11P51784 HMGB1P29-201ENST00000505659 499 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC022447.3-201ENST00000506865 495 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 GLUD1P3-202ENST00000508551 200 ntBASIC6.31□□□□□ -1.4
USP11P51784 SCARNA21.2-201ENST00000516600 166 ntBASIC6.31□□□□□ -1.4
USP11P51784 ARL2BPP5-201ENST00000523141 481 ntBASIC6.31□□□□□ -1.4
USP11P51784 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 AC093027.1-201ENST00000546698 429 ntBASIC6.31□□□□□ -1.4
USP11P51784 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.31□□□□□ -1.4
USP11P51784 AL352979.3-201ENST00000553515 247 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC090515.3-201ENST00000560431 315 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC025678.1-201ENST00000567861 338 ntBASIC6.31□□□□□ -1.4
USP11P51784 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 AC069304.2-201ENST00000605154 435 ntBASIC6.31□□□□□ -1.4
USP11P51784 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 AC004076.2-201ENST00000620532 3323 ntBASIC6.31□□□□□ -1.4
USP11P51784 OR4G11P-202ENST00000642116 1414 ntBASIC6.31□□□□□ -1.4
USP11P51784 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
USP11P51784 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 MTCO1P7-201ENST00000419523 1542 ntBASIC6.3□□□□□ -1.4
USP11P51784 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 AC006484.1-201ENST00000435086 1884 ntBASIC6.3□□□□□ -1.4
USP11P51784 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 SNORA51.1-201ENST00000363243 140 ntBASIC6.3□□□□□ -1.4
USP11P51784 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 RNA5SP105-201ENST00000391123 113 ntBASIC6.3□□□□□ -1.4
USP11P51784 EI24P3-201ENST00000399046 1062 ntBASIC6.3□□□□□ -1.4
USP11P51784 RPL23AP47-201ENST00000408017 460 ntBASIC6.3□□□□□ -1.4
USP11P51784 GAPDHP49-201ENST00000421421 961 ntBASIC6.3□□□□□ -1.4
USP11P51784 RPS27AP14-201ENST00000422868 454 ntBASIC6.3□□□□□ -1.4
USP11P51784 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 AC093716.1-201ENST00000435923 377 ntBASIC6.3□□□□□ -1.4
USP11P51784 AC012075.1-201ENST00000436549 580 ntBASIC6.3□□□□□ -1.4
USP11P51784 SDCBPP1-201ENST00000440192 890 ntBASIC6.3□□□□□ -1.4
USP11P51784 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 RPS23P9-201ENST00000448848 438 ntBASIC6.3□□□□□ -1.4
USP11P51784 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 AZGP1P2-201ENST00000454506 345 ntBASIC6.3□□□□□ -1.4
USP11P51784 AC026412.2-201ENST00000512270 1075 ntBASIC6.3□□□□□ -1.4
USP11P51784 RNU6-327P-201ENST00000516270 127 ntBASIC6.3□□□□□ -1.4
USP11P51784 RNU6-1045P-201ENST00000516321 107 ntBASIC6.3□□□□□ -1.4
USP11P51784 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 AC239860.2-201ENST00000525886 270 ntBASIC6.3□□□□□ -1.4
USP11P51784 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms