Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AC007559.1-201ENST00000428736 355 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.47□□□□□ -1.69
CENPAP49450 SETP8-201ENST00000435341 628 ntBASIC4.47□□□□□ -1.69
CENPAP49450 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 AL450023.3-201ENST00000440592 271 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AL391987.1-201ENST00000441025 200 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.47□□□□□ -1.69
CENPAP49450 MTND3P1-201ENST00000441336 220 ntBASIC4.47□□□□□ -1.69
CENPAP49450 RPS27AP15-201ENST00000447672 466 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 RPL23AP15-201ENST00000450202 459 ntBASIC4.47□□□□□ -1.69
CENPAP49450 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.47□□□□□ -1.69
CENPAP49450 AL691482.1-201ENST00000453255 87 ntBASIC4.47□□□□□ -1.69
CENPAP49450 RPL21P134-201ENST00000453468 483 ntBASIC4.47□□□□□ -1.69
CENPAP49450 ART2BP-201ENST00000453501 499 ntBASIC4.47□□□□□ -1.69
CENPAP49450 RPS21P4-201ENST00000487122 248 ntBASIC4.47□□□□□ -1.69
CENPAP49450 RPS6P4-201ENST00000494693 758 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.47□□□□□ -1.69
CENPAP49450 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 RNU6-885P-201ENST00000516607 104 ntBASIC4.47□□□□□ -1.69
CENPAP49450 RNA5SP135-201ENST00000517019 125 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.47□□□□□ -1.69
CENPAP49450 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.47□□□□□ -1.69
CENPAP49450 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.47□□□□□ -1.69
CENPAP49450 MIR4458-201ENST00000578872 75 ntBASIC4.47□□□□□ -1.69
CENPAP49450 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 AL390838.2-201ENST00000602394 274 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AL031281.1-201ENST00000604049 488 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AL158042.1-201ENST00000605338 460 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AP003072.4-201ENST00000624580 310 ntBASIC4.47□□□□□ -1.69
CENPAP49450 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CENPAP49450 AL672167.1-205ENST00000641112 3080 ntBASIC4.47□□□□□ -1.69
CENPAP49450 MTCO1P14-201ENST00000441695 1559 ntBASIC4.47□□□□□ -1.69
CENPAP49450 AC012321.1-201ENST00000561622 1588 ntBASIC4.47□□□□□ -1.69
CENPAP49450 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
CENPAP49450 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CENPAP49450 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.69
CENPAP49450 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.46□□□□□ -1.69
CENPAP49450 AL672167.1-204ENST00000641875 3017 ntBASIC4.46□□□□□ -1.69
CENPAP49450 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CENPAP49450 AC106871.1-201ENST00000568324 3102 ntBASIC4.46□□□□□ -1.69
CENPAP49450 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 AC016716.1-201ENST00000265882 708 ntBASIC4.46□□□□□ -1.7
CENPAP49450 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 RNU6-1066P-201ENST00000363573 105 ntBASIC4.46□□□□□ -1.7
CENPAP49450 RNU6-157P-201ENST00000383957 107 ntBASIC4.46□□□□□ -1.7
CENPAP49450 SNORA66-201ENST00000384792 133 ntBASIC4.46□□□□□ -1.7
CENPAP49450 MIR217-201ENST00000384817 110 ntBASIC4.46□□□□□ -1.7
CENPAP49450 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.7
CENPAP49450 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.46□□□□□ -1.7
CENPAP49450 RNA5SP80-201ENST00000410475 111 ntBASIC4.46□□□□□ -1.7
CENPAP49450 RN7SKP177-201ENST00000410567 355 ntBASIC4.46□□□□□ -1.7
CENPAP49450 RNU2-42P-201ENST00000410697 113 ntBASIC4.46□□□□□ -1.7
CENPAP49450 RAP1BP1-201ENST00000412709 553 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 MTND4P22-201ENST00000413116 1169 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.46□□□□□ -1.7
CENPAP49450 PRELID3BP11-201ENST00000414230 479 ntBASIC4.46□□□□□ -1.7
CENPAP49450 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 QRSL1P2-201ENST00000418582 964 ntBASIC4.46□□□□□ -1.7
CENPAP49450 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AC007394.1-201ENST00000421941 531 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.46□□□□□ -1.7
CENPAP49450 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CENPAP49450 Z93242.1-201ENST00000427102 353 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.46□□□□□ -1.7
CENPAP49450 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 RPL37P1-201ENST00000432310 284 ntBASIC4.46□□□□□ -1.7
CENPAP49450 BX323845.1-201ENST00000432417 179 ntBASIC4.46□□□□□ -1.7
CENPAP49450 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.46□□□□□ -1.7
CENPAP49450 MTND1P32-201ENST00000433043 938 ntBASIC4.46□□□□□ -1.7
CENPAP49450 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.46□□□□□ -1.7
CENPAP49450 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.46□□□□□ -1.7
CENPAP49450 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.46□□□□□ -1.7
CENPAP49450 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CENPAP49450 RFC5P1-201ENST00000454419 874 ntBASIC4.46□□□□□ -1.7
CENPAP49450 AC112206.1-201ENST00000468416 477 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms